Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0609 |
Symbol | |
ID | 6408259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 662690 |
End bp | 664957 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642710522 |
Product | PTSINtr with GAF domain, PtsP |
Protein accession | YP_001989644 |
Protein GI | 192289039 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.125337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGAGCA CGTCGGGTGG CCCCCGCGTC TTGCTGAGAC GGCTCCGCGA AACCATGGCG GAGCAAGTCT CCGCGCAGGA ACGCCTCGAC AAGATCGTGG TGTTGATCGC GGCCAACATG GTCGCCGAAG TGTGCTCGGT CTATGTGCTG CGGATCGACA ACACCCTCGA GCTGTACGCC ACCGAAGGTC TGAACCGCGA GGCGGTGCAC CAGACCGTGC TGAACGCCCA CGAAGGTCTG GTCGGTCTGG TCGCCTCGGA AGCGACGCCG CTGAACCTGT CGGATGCGCA AAGCCATCCG GCGTTCTCGT TCCGCCCGGA GACCGGCGAA GAAATCTACC ACTCGTTCCT CGGCGTGCCG ATCCTGCGCG CCGGCAATAC CCTCGGCGTG CTGGTGGTGC AGAACCGCGC CAAGCGCACC TATGTCGAGG AAGAGGTCGA GGCGCTGCAG ACCACCGCGA TGGTGCTGGC CGAGATGATC GCCTCGGGCG AGCTGTCGGC GCTGGCTCAG CCCGGTGCCG AACCGGCGGC GCGGCACTCG ATCCACAAAA CCGGTGCGGT GCTGTCCGAC GGCATCGCGC TTGGTCACGT CGTGCTGCAC GAGCCGCGCG TCGTCATCAC CAATTACATC GCCGAAGACC TGCCGAAGGA AATCAAGCGG CTCGACGCGG CGCTCGCCAA GCTGCGCTCC GATCTCGACC GGATGCTGGA GCGGGGCGAC TTCGCCGAGG GCGGTGAGCA TCGCGACGTG CTCGAAGCCT ACCGGATGTT CGCCAATGAT CACGGCTGGT CGCACAAGCT GCACGAAGCG GTCGCCACCG GTCTCACCGC CGAGGCCGCG GTCGAACGCG TGCAGTCGGA CACCAGAGCG CGGATGCTAC GCTCGACCGA TCCTTACTTG CGCGACCGGC TGCACGATCT CGAAGATCTC GGCCACCGCC TGATGCGCCA GCTCGTCGGG CAGGACCATG CGCCGTCGCG CGAGCAACTG CCTGACAATG CCATCCTGAT CGCGCGCTCG ATGGGGCCTG CGGCGCTGCT CGACTACGAC CGCAAGCGGC TGCGCGGCCT GGTGCTCGAA GAAGGCACCG CCAATTCGCA CGTCTCGATC GTGGCGCGCG CCCTCGGCAT CGCGGCGATC GGCGAGGTGC CGAACGCGCC AGGCATCGCC GATCCGGGCG ACGCGATCAT CGTCGATGCC ACCTCGGGCT CGATCTATGT CCGCCCGTCT GCCGAAATCG AAGCCGCCTA TGCGGAGCGG GTGCGCTTCC GCGCCCGGCG ACAGGCGCAG TATTCGGCGC TGCGCGATCT GCCCTGCGCC ACCAAGGATG GCCAGCCGAT CGATCTGATG ATCAACGCGG GTCTGACCAT CGACCTGCCG CACATCGAAG ACACCGGCTC TTCCGGCATC GGCCTGTTCC GCACCGAGCT GCAGTTCATG GTCGGCCAGA GCCTGCCGCG CTCGTCCGAT CAGCTCGCGC TGTATCGCGC CGTGCTCGAC GCCGCCGGCA GCAAGCCGGT GACCTTCCGC ACCCTCGACA TAGGCGGCGA CAAGGCGCTG CCCTACATGG AGACGGTGGT CGAGGAGAAT CCGGCGCTGG GCTGGCGCGC GATCCGGCTC GGGCTCGACC GGCCCGGCCT GCTGCGCAGC CAGATTCGAG CGCTGCTGCG TGCCGCCGCG GGTCGTTACC TGCGGGTGAT GTTCCCGATG ATCTCTGAGG TGGCCGAGTT CGATGCCGCC AAGAGCATCA TCGAGCGCGA ACTGACTTAT CTGCGCCAGC ATGGCCATAC CCTGCCGGAG CGCGTCGACG TCGGCACCAT GCTGGAAGTG CCGGCGCTGT TGTATCAGCT CGACGAGCTG TTCAAGCGCG CGGACTTCGT GTCGGTGGGC TCCAACGACC TGTTCCAGTT CCTGTTCGCA GTCGATCGCG GCAACTCGAA AGTGTCGGAA CGGTTCGACA CGCTGTCGGC GCCGATCCTG CGGGCGCTGC GCGACATCGT CCGCAAGGCG CGTGCGGCCA AGCGCTCACT GTCGCTGTGC GGCGAGATGG CATCGCAGCC GCTGGCGGCA TTGGCCCTGA TCGCGATCGG CTACCGCTCG CTGTCGGTGT CTGCACTGGC GCACGGCCCG GTGAAGGCGA TGATCCTCGG TCTCGACCTC GCCAAGGCGG AGGCGATGAT CGGGCCGCTG CTCGACGCGC CGGCCGGCAG CGTCTCGATT CGCGACAAGC TGATCGAATT CGCCGAAGCG CATCAGCTCG CTTTGTAG
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Protein sequence | MRSTSGGPRV LLRRLRETMA EQVSAQERLD KIVVLIAANM VAEVCSVYVL RIDNTLELYA TEGLNREAVH QTVLNAHEGL VGLVASEATP LNLSDAQSHP AFSFRPETGE EIYHSFLGVP ILRAGNTLGV LVVQNRAKRT YVEEEVEALQ TTAMVLAEMI ASGELSALAQ PGAEPAARHS IHKTGAVLSD GIALGHVVLH EPRVVITNYI AEDLPKEIKR LDAALAKLRS DLDRMLERGD FAEGGEHRDV LEAYRMFAND HGWSHKLHEA VATGLTAEAA VERVQSDTRA RMLRSTDPYL RDRLHDLEDL GHRLMRQLVG QDHAPSREQL PDNAILIARS MGPAALLDYD RKRLRGLVLE EGTANSHVSI VARALGIAAI GEVPNAPGIA DPGDAIIVDA TSGSIYVRPS AEIEAAYAER VRFRARRQAQ YSALRDLPCA TKDGQPIDLM INAGLTIDLP HIEDTGSSGI GLFRTELQFM VGQSLPRSSD QLALYRAVLD AAGSKPVTFR TLDIGGDKAL PYMETVVEEN PALGWRAIRL GLDRPGLLRS QIRALLRAAA GRYLRVMFPM ISEVAEFDAA KSIIERELTY LRQHGHTLPE RVDVGTMLEV PALLYQLDEL FKRADFVSVG SNDLFQFLFA VDRGNSKVSE RFDTLSAPIL RALRDIVRKA RAAKRSLSLC GEMASQPLAA LALIAIGYRS LSVSALAHGP VKAMILGLDL AKAEAMIGPL LDAPAGSVSI RDKLIEFAEA HQLAL
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