| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0561 |
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| Symbol | |
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| ID | 6408211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 609985 |
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| End bp | 610902 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710474 |
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| Product | Pirin domain protein |
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| Protein accession | YP_001989596 |
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| Protein GI | 192288991 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0589357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTGGA TGCCCACCAA CGATCCGGTG CTCGGCGATC CGACCACCTG CGATGCGCTG
GAATTGATCA TCGTGCCGCG GACGCGCGAT CTCGGCGACG GCTTCGCGGT GCGCCGGGCG
CTGCCGCACG GCAAGCGGCA GATGGTCGGC CCGTTCATCT TCTTCGATCA CTTCGGGCCG
GTGCAGTTCA TCGCCGGCAA GGGCATGGAC GTGCGGCCAC ATCCGCATAT CGGGCTTGCC
ACCGTCACCT ACCTGTTCGA CGGCAAGATC ATGCACCGCG ACAGCGAGGG CAACATTCAG
GAAATCGCGC CCGGCGCGAT GAACCTGATG ACCGCCGGGC GCGGCATCGC GCATTCGGAG
CGCACGCCGG ATGTCGAGCG CAGCGTCGGC CAGTCGATGC TCGGCCTGCA GAGCTGGATC
GCGCTGCCGC AGGCTTCCGA AGAGATCGCG CCGAGCTTCC AGCACTTCGC CGCGGCGACG
CTGCCGATGG TGCAGGACAC CGGCTTCACC GCCCGGGTGA TCGCCGGCTC CGCCTTCGGC
AAAGCCTCGC CGGTGACGAT GGTGTCGCCG TGGTTCTATG TCGAGGTCAA CGCCAAGGCC
GGCACCGCGG TGCCGCTCGA TCCGGACCAC GAGGAGCGCG CGATCTATGT GGTCGACGGC
GAGGTCGAGA TCGCCGGCGA GCGCCACGTC GGCCCGACCC TGCTGATTTT CCGCCCCGGC
GACCGCATCA CTGTCCGGGC AAAGACGGAC ACGCGGATGA TGTTCCTCGG CGGCGATGCG
CTGGAGGGGC CGCGCCACAT CTGGTGGAAT TTCGTCTCGT CCAGCAAAGA GCGGATCGAA
CAGGCCAAAC AGGACTGGAA AACCGGTCGT TTCGCCGCAG TCCCGAACGA GAGCGAGTTC
ATTCCGCTGC CGGAATGA
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| Protein sequence | MSWMPTNDPV LGDPTTCDAL ELIIVPRTRD LGDGFAVRRA LPHGKRQMVG PFIFFDHFGP
VQFIAGKGMD VRPHPHIGLA TVTYLFDGKI MHRDSEGNIQ EIAPGAMNLM TAGRGIAHSE
RTPDVERSVG QSMLGLQSWI ALPQASEEIA PSFQHFAAAT LPMVQDTGFT ARVIAGSAFG
KASPVTMVSP WFYVEVNAKA GTAVPLDPDH EERAIYVVDG EVEIAGERHV GPTLLIFRPG
DRITVRAKTD TRMMFLGGDA LEGPRHIWWN FVSSSKERIE QAKQDWKTGR FAAVPNESEF
IPLPE
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