| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0489 |
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| Symbol | |
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| ID | 6408138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 528629 |
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| End bp | 529465 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710401 |
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| Product | transcriptional regulator, CarD family |
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| Protein accession | YP_001989524 |
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| Protein GI | 192288919 |
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| COG category | [K] Transcription |
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| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACCA AGTCTGCGAA AACTCCCGCC CAGCCGGCGG CCTCCAAGCC CGCCGCAGCA
ACCAAGCCGG CGGCGAAGCC TGCCAAGGCT GCCGTCGCTC CGAAGGCGGA GGTGAACGCC
GAGGTCAAGA CCGAGGTGAA GGCGCCGGTT GCCAAGGCGG CGGCGAAGCC GGAAGTGAAG
CAGCCTGTGG CGGCGGCAAA GCCGGCGGCC CCTGCGCCCG CGCGCGTCGA GGAGCCGAAG
AAGGCCGTCA CCCAGCGTCA GGGCTTCAAG GCCAACGAAT TCGTGGTCTA TCCGGCCCAC
GGCGTCGGCC AGATCCTGGC GATCGAGGAG CAGGAAATCG CGGGCGCCAA GCTTGAGTTG
TTCGTCATCA ACTTCATCAA GGACAAGATG ACGCTGCGCG TGCCCACCGC GAAGGTCGGC
AATGTCGGCA TGCGCAAGCT GTCCGATCCG GCGCTGGTGA AGAAGGCGTT GGAAACCCTG
AAGGGCCGTG CCCGCGTCAA GCGGACGATG TGGTCGCGCC GCGCGCAGGA ATACGAAGCC
AAGATCAACT CGGGCGACAT CGTCGCGATC GCCGAGGTGG TCCGCGACCT GTACCGCTCG
GAATCGCAGC CGGAGCAGTC CTACAGCGAA CGGCAGCTCT ATGAAGCCGC ACTCGACCGC
CTGTCGCGCG AGATCGCGGT GGTGCAGCAC ATCACCGAGA CCGAAGCCGT CAAGGAAGTC
GAGAGCCAGC TCGCCAAGAG CCCGCGCCGC GGCGCCAAGG CCGAGGCGGA AGCCGAGGCC
GATGCGGATC TCGATGGCGA TTCCGACGAC GAGGCGGTGA CCGACGAGGC CGCGTAA
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| Protein sequence | MPTKSAKTPA QPAASKPAAA TKPAAKPAKA AVAPKAEVNA EVKTEVKAPV AKAAAKPEVK
QPVAAAKPAA PAPARVEEPK KAVTQRQGFK ANEFVVYPAH GVGQILAIEE QEIAGAKLEL
FVINFIKDKM TLRVPTAKVG NVGMRKLSDP ALVKKALETL KGRARVKRTM WSRRAQEYEA
KINSGDIVAI AEVVRDLYRS ESQPEQSYSE RQLYEAALDR LSREIAVVQH ITETEAVKEV
ESQLAKSPRR GAKAEAEAEA DADLDGDSDD EAVTDEAA
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