| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0462 |
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| Symbol | |
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| ID | 6408110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 497127 |
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| End bp | 498821 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642710374 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_001989498 |
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| Protein GI | 192288893 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAGCT CGACCCCCAG CTATGTCTGC GGCGTCTCCG ACGCCCCGCT GCTCGGAATT
ACCATTGGCC AGGCGCTCGA CCGCGCGGTG GCGCTGTGGC CGGATCGCGA AGCGCTGGTT
TCACCCAGCC ATGACACCCG ATGGACCTGG CGCGACTTCG CCGCGCGGGT GGATGCGCTG
GCAGCCGGTT TTCTCGCGCT CGGCCTGGAG CGCGGCGCCC GCATCGGCAT CTGGTCGATG
AACCGGCCGG AATGGACCCT CACACAATTC GCCGCCGCCA AAGCGGGACT GATTCTGGTC
ACCATTAATC CGGCCTACCG CCTGAGCGAA CTGGAATTCG CGCTCGCCAA GGTTGGCTGC
GCCGCACTGG TGACCGCCAC CGCGTTCAAG ACCTCGCACT ACATGGAGAT GTTGAATACG
CTGATCCCGG AACTGGCGAC CTCGCCGCCC GGCGCGCTGC AATCGGCCAA ACTGCCGAAG
CTGCGGACCG TTATCCAAAT CGGCGGACCG AAAGCGCCGG GGACGATCGC ATTCGACGAG
GTCGCGGCCA TGGGCGGCGC GCGGCACCGC GATCAGATCG CCGCCTTCGC AAGCGAGCTG
CAGTTCGACG ATGCCGTCAA CATCCAGTTC ACCAGCGGCA CCACCGGCTC GCCCAAGGGC
GTGACGCTGA CGCATCACAA CATCCTCAAC AACGGTTACT TCGTCGGCCG CGCGATGAAG
CTGACAGAGG CGGACCGGAT CTGCATTCCG GTGCCGCTGT ATCATTGCTT CGGCATGGTG
ATGGGCAACC TCGCCTCGGT CACCTCCGGC GCCGCGATGG TGTATCCCGG CGAAGGCTTC
GACCCGCTGG TGACGCTGCA GACTGCTTCA CGCGAGAAAT GCACGGCGCT GTACGGCGTG
CCGACGATGT TCATCGCTGA GCTCGATCAT CCGGAGTTCG CCAGCTTTGA TCTGTCGTCA
CTGCGCACCG GGATCATGGC GGGCGCGCCG TGCCCGGTTG AAGTGATGCG CCGGGTCAAC
GATGCGATGA ACATGCGCGA AGTGACCATC GCCTACGGCA TGACCGAGAC CAGCCCGGTC
AGCTTTCAGA GCGCGGTCGA CGATCCGGAA GAGCGGCGGG TCTCGACCGT CGGCCGCATT
CATCCGCATG TCGAAGTGAA AGTCGTCGAT CTCGACGGCA AGATCGTGCC GCGCGGCCAG
CGCGGCGAAC TCTGCACCCG CGGCTACAGC GTGATGCTCG GCTATTGGGA CGAGGCGGAG
AAAACCGCCG ACGTACTCGA TGCCGCCGGC TGGATGCACA CCGGCGATCT CGCCACCATC
GACGACGAAG GCTTCTGCAA CATCGTCGGC CGCATCAAGG ACATGGTGAT CCGCGGCGGC
GAGAACCTGT ATCCGCGCGA GATTGAGGAA TTCCTGTATC GCCACCCCAA GATCCAGGAC
GTCCAGATCT TCGGTGTCGC CGACGACCGC TACGGCGAAG AACTCTGCGC CTGGGTCCGC
CCGCGCCCGG GAGAAACGCT GACCGCCGAC GACGTCCGCG CGTTCTGCCA GGGCCAGATC
GCCCATAACA AGATCCCGCG CTACATCGAA TTCGTCGACG AATTCCCGAT GACGGTGACC
GGCAAGATCC AGAAATTCAT CATGCGCGAG AAGGTCGAGT CCAAGCTCGG GCTGAAGGCG
GCAAAGACGG CGTGA
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| Protein sequence | MTSSTPSYVC GVSDAPLLGI TIGQALDRAV ALWPDREALV SPSHDTRWTW RDFAARVDAL
AAGFLALGLE RGARIGIWSM NRPEWTLTQF AAAKAGLILV TINPAYRLSE LEFALAKVGC
AALVTATAFK TSHYMEMLNT LIPELATSPP GALQSAKLPK LRTVIQIGGP KAPGTIAFDE
VAAMGGARHR DQIAAFASEL QFDDAVNIQF TSGTTGSPKG VTLTHHNILN NGYFVGRAMK
LTEADRICIP VPLYHCFGMV MGNLASVTSG AAMVYPGEGF DPLVTLQTAS REKCTALYGV
PTMFIAELDH PEFASFDLSS LRTGIMAGAP CPVEVMRRVN DAMNMREVTI AYGMTETSPV
SFQSAVDDPE ERRVSTVGRI HPHVEVKVVD LDGKIVPRGQ RGELCTRGYS VMLGYWDEAE
KTADVLDAAG WMHTGDLATI DDEGFCNIVG RIKDMVIRGG ENLYPREIEE FLYRHPKIQD
VQIFGVADDR YGEELCAWVR PRPGETLTAD DVRAFCQGQI AHNKIPRYIE FVDEFPMTVT
GKIQKFIMRE KVESKLGLKA AKTA
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