Gene Rpal_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0427 
Symbol 
ID6408075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp458213 
End bp458737 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID642710339 
Productprotein of unknown function DUF1058 
Protein accessionYP_001989463 
Protein GI192288858 
COG category[S] Function unknown 
COG ID[COG3807] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGA AATACCTGAT GGCGGTAACG GCGTTCGCAG GTGCGATGAT TTGCGCCGCG 
ACCTTCGCGC ACGCCGGCAA GGAGTCACCG TTGTCGGCGA GCGGACTGCC GGTGCCGCGA
TACGTCAGTC TTAAGTCTGA TCACGTCAAT GTCCGGGTCG GGCCGACCAA GGACAACGAC
GTCGCCTGGG TCTACACCCG CGCCGGCCTG CCGGTCGAAG TCACGGCCGA GTTCGAGAAC
TGGCGCCGGG TCCGGGACTC CGAGGGCGCC GAGGGGTGGG TATATCACTC GCTCCTGTCC
GGTCGCCGCA CCGCGGTCGT CACCATGAAG GACAAAGACG GCTTGGCGCC GCTGTATGAG
AGCGCCAGCT CCGGCAGCGC CGTGGTGGCC CGGCTGCAGG CCGGCGTGGT GGCCCAGGTC
AAGCGCTGCG ACATGAAATG GTGCCGGATC GTCGGGAGTG GCTTCGACGG CTGGATCGAG
AAGCTGCAGC TGTGGGGCGT TTACGCCGAC GAGCAGGTCA ACTGA
 
Protein sequence
MTMKYLMAVT AFAGAMICAA TFAHAGKESP LSASGLPVPR YVSLKSDHVN VRVGPTKDND 
VAWVYTRAGL PVEVTAEFEN WRRVRDSEGA EGWVYHSLLS GRRTAVVTMK DKDGLAPLYE
SASSGSAVVA RLQAGVVAQV KRCDMKWCRI VGSGFDGWIE KLQLWGVYAD EQVN