Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0420 |
Symbol | |
ID | 6408068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 451429 |
End bp | 452241 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642710332 |
Product | enoyl-CoA hydratase |
Protein accession | YP_001989456 |
Protein GI | 192288851 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.697882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCTATC AGGACATCCT CTATGAGGTC GCCGACAAAA TCGCGACTAT CACGCTGAAC CGGCCGGACC GCATGAATGC GTGGACGCCG GTGATGGAGC GCGAGGTTCG GACGGCGATG CAGCAGGCGG CCGCTGACAG CGAGGTGCGC GTCATCGTGC TGACCGGCGC CGGCCGCGGC TTCTGTGCCG GCGCCGACAT GCAGGTGCTG CAGACCATCG ATCCGTCCGA CGTGCGCCGT GCCACCGACC TGCCGCCGTT CGACATGAAT CGTCGCCCCG ATTGGCAGAC GCGCTACGCG TTCTATCCGT CGATTCCCAA GCCGATCATC GGCATGCTCA ACGGCGCCAC GGCGGGCATC GGTCTGGTGC ACGCGCTGTA TTGCGACGTT CGCTTCGCCG CCGACTCTGC GGTGTTCACC ACCGCCTTTG CGCGCCGCGG ACTGATCGCC GAGCACGGCA TCTCCTGGAT GCTGCCGCGG ATCGTCGGCC ACGCCAACGC GCTCGACCTG CTGCTGTCGG CGCGCCGGGT CTCGGCCGAG GAGGCGCTGC GGATGGGGCT CGTCAACCGG CTCTATCCGA TCGATCAGCT CCGCGAGCAG ACCTATGCCT ACGCCCGCGA CCTCGCCGAC AACGTCGCCC CGGCCTCGAT GCAGGTGATC AAGCGCCAGC TCTACGAGGT GCCGTTCCAG ACGCTGGCGG AAGCCACGAT CGACGCCAAT CGCGAGATGG CGATCTCGCT CGCCAGCGAC GATTTCAAAG AAGGCGTCGC CAGCTTCGTC GAAAAGCGCC CGCCGCGATT CAGCAGCGTG TGA
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Protein sequence | MSYQDILYEV ADKIATITLN RPDRMNAWTP VMEREVRTAM QQAAADSEVR VIVLTGAGRG FCAGADMQVL QTIDPSDVRR ATDLPPFDMN RRPDWQTRYA FYPSIPKPII GMLNGATAGI GLVHALYCDV RFAADSAVFT TAFARRGLIA EHGISWMLPR IVGHANALDL LLSARRVSAE EALRMGLVNR LYPIDQLREQ TYAYARDLAD NVAPASMQVI KRQLYEVPFQ TLAEATIDAN REMAISLASD DFKEGVASFV EKRPPRFSSV
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