| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0340 |
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| Symbol | |
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| ID | 6407986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 359164 |
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| End bp | 359877 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710250 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001989376 |
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| Protein GI | 192288771 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0196979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCCAG TCGATATCCC TGACCGCGAC CGGCTGATCG TCGCGCTCGA TTTGCCTGAT
CTCCGTGTCG CCGAAGCGAT GGTCGACCGG CTCGGCGACA GCGTCGGTTT CTACAAGATC
GGCTATCAGC TCGCTTATGC GGGCGGCCTG CCGCTCGCCC GCGCTCTGGT CGGCGCTGGC
AAGAAGGTGT TCGTCGACCT CAAGCTGCAC GACATCGGCA ACACCGTCGC GCGCGGCGTC
GAAAGCCTGA GCCATCTCGG CGCATCCTTC CTCACCGTCC ATGCCTACCC GCAGACCATG
AAGGCCGCGG TCGAGGCCCG TGGCTCCTCG AAGGTGAAGA TCCTCGCTGT CACCGTGCTG
ACCTCTTATG ACGACCGCGA TCTGGCGGAC GCCGGCTATC GGTTCGGCGT GCGCGACCTG
GTCGAAGCGC GCGCCCGCCA GGCGCAGGCG ATCGGTGTCG ACGGCCTGGT CTGTTCGCCG
GAGGAAGCCG CGCATCTGCG CGGCATTGTC GGACCCGAGA TGGATCTGGT GACGCCGGGG
ATTCGCCCCG CGGGTGCTGC GGCCGGCGAT CAGAAGCGGA TCATGACGCC CGCCAAGGCG
ATCGCGGCCG GTGCCAGCTA TCTGGTGGTC GGTCGGCCGG TGCTGGACGC GCCAGATCCC
AAGGCCGCTG CGGATGCGAT CGTTGCCGAG ATCGCTGCCG CACGCGGATC ATAA
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| Protein sequence | MAPVDIPDRD RLIVALDLPD LRVAEAMVDR LGDSVGFYKI GYQLAYAGGL PLARALVGAG
KKVFVDLKLH DIGNTVARGV ESLSHLGASF LTVHAYPQTM KAAVEARGSS KVKILAVTVL
TSYDDRDLAD AGYRFGVRDL VEARARQAQA IGVDGLVCSP EEAAHLRGIV GPEMDLVTPG
IRPAGAAAGD QKRIMTPAKA IAAGASYLVV GRPVLDAPDP KAAADAIVAE IAAARGS
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