| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0330 |
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| Symbol | |
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| ID | 6407976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 348640 |
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| End bp | 349797 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710240 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001989366 |
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| Protein GI | 192288761 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.154347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGGCTA GCTCCGACCC AGCTTTTGGC GTCTACGTGC ACTGGCCGTT CTGCCTGTCG
AAGTGCCCGT ATTGCGACTT CAACAGCCAT GTCCGCCACG CCGCGATCGA CGAGGAGCGG
TTCGCCCGCG CCTTCGCGCG TGAGATCGCC ACCACCGCAG AGCGAATCGG GCCGCGCCAG
GTGAGCTCGA TCTTTCTTGG CGGTGGCACC CCATCTCTGA TGCAGCCCTC GACCGTGGCG
GCGATCCTCG ACGCGATCGC CCGGCATTGG CACGTCGAAC CCGGGGCCGA AGTGACGCTC
GAGGCCAACC CAACCAGCGT CGAGGCCACG CGGTTTCGCG GCTATCGGGC TGCAGGCGTC
AACCGCGTGT CACTCGGCGT GCAGGCGCTG GACGACGCGT CGCTGAAGGC GCTTGGGCGA
ATGCATTCGG CCGAAGAAGC CTTGAACGCG GTGGCGATCG CCAAGTCGGC GTTCGATCGT
TACTCGTTCG ACCTGATCTA TGCGCGGCCC GGACAGACCG CTGCGATGTG GGAAGCCGAG
CTGCGCTACG CGATCGGCGA GGCCGCAGAG CATCTGTCGC TGTATCAGCT CACCATCGAG
CCCGACACGC CGTTCTATTC CCTGCACAAG GCCGGCAAGC TGCCGACGCC GGACGAGGCC
GAGGCGCGGG CGCTGTACGA TGTCACGCAA TCGGTCTGCG CCGAACTCGG ACTCCCAGCC
TATGAGATTT CCAACCACGC CCGCCCGGGC GCGGAATGTC GGCACAACCT GATCTATTGG
CGCGGCCACG AATATGCCGG GATCGGCCCC GGCGCGCACG GCCGCCTCGA CATCGGCAAT
GCGCGCTACG CCACCGCCAC CGAGAAGCGT CCCGAGAGCT GGCTGATGCG GGTGGAAGCC
ACCGGTCACG GCCTGATCGC CGACGAACAC CTCACCAGCG AGGAGCGCGC CGACGAATTC
CTGCTGATGG GGCTGCGGCT TGCCGAAGGC ATTGATCCGC AGCGCTATCA GTTGCTGTCC
GGCCGCCCGC TCGATCCGTC GCGGATCGCG CTGCTGCGCG AAGAGGGCGC GATCGCGGTC
GATGCCGACG GCCGCTTGCG CGTGACGCAA GAGGGCTTCC CGGTGCTCGA CGCCGTGGTG
GCCGATCTGG CGGCATAG
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| Protein sequence | MQASSDPAFG VYVHWPFCLS KCPYCDFNSH VRHAAIDEER FARAFAREIA TTAERIGPRQ
VSSIFLGGGT PSLMQPSTVA AILDAIARHW HVEPGAEVTL EANPTSVEAT RFRGYRAAGV
NRVSLGVQAL DDASLKALGR MHSAEEALNA VAIAKSAFDR YSFDLIYARP GQTAAMWEAE
LRYAIGEAAE HLSLYQLTIE PDTPFYSLHK AGKLPTPDEA EARALYDVTQ SVCAELGLPA
YEISNHARPG AECRHNLIYW RGHEYAGIGP GAHGRLDIGN ARYATATEKR PESWLMRVEA
TGHGLIADEH LTSEERADEF LLMGLRLAEG IDPQRYQLLS GRPLDPSRIA LLREEGAIAV
DADGRLRVTQ EGFPVLDAVV ADLAA
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