| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0318 |
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| Symbol | |
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| ID | 6407964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 337371 |
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| End bp | 338321 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710228 |
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| Product | putative hemolysin |
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| Protein accession | YP_001989354 |
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| Protein GI | 192288749 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3176] Putative hemolysin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.361608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACACCG ACCATCTCGC CCGTTCGAAG AAATTCATCA AGCTGCTGCG CCCGGAGACC
GCCGGAGCCG CCGCGCAAAC CGCAATTACC TGGTTCAAGC CCGCGCTCAA ACTGGCCGAG
ACCGGCAAAC CGATCGGCCC GTCGCCCGCG ACGCTGGGCC GCCTCGGGCC GCTCGAAGTT
CGGCTCGCGC AGACCAAGCA GGACGTCAAG CGCGCCCAGA AGCTGCGCTA TCGGGTGTTC
TACAAGGACG GCACCGCGAT TGCCGACGCC CCGACGATGC TCGCTCGCCG TGACAAGGAC
GCATTCGACC CGATCTGTGA TCACCTGCTG GTGGTCGATC ACGCAGCCAA GCCGTCGCTG
AGCGGCAAGC AGCCGGTGGT CGGCACCTAT CGGCTGCTCC GTCAGGACGT CGCCAATCGC
AACGGCGGCT TCTACACCGA GAGCGAGTTC GACATCGGCG GACTGATCAC CCGGCACCCG
GAGCTGCGCT TTCTCGAACT CGGCCGCTCC TGCGTGCTGC CGCCGTATCG TAACAAGCGC
ACCGTCGAGC TGCTGTGGCA CGGCATCTGG ACTTATGTCC GGCAGCATGG CGTTGACGTC
ATGCTCGGTT GCGCCAGCTT CGACGGCACC GATCCGGATC GCCTGGCACT GCCGCTGTCG
TTCCTGCATC ACTACGCGCC GGCGCCGGAA GCCTGGCGGG CCCGCGCGCA CCCGTCGCGC
TATGTCGAGA TGAACCGGCT GCCGAAAGAG GCGATCGACC AGAAGGCGGC ACTGCGGGAA
CTGCCGCCGC TGATCAAAGG CTATCTGCGG CTCGGCGCCA CGATCGGCGA GGGTGCGGTG
ATCGACTATC AGTTCGGTAC CACCGACGTG TTGATCATCC TGCCGGTCTC GGCAATCAGC
GCCCGCTATA TCGAACATTT CGGCGCGGAT GCGTCACGGC ACGCGGCGTA G
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| Protein sequence | MHTDHLARSK KFIKLLRPET AGAAAQTAIT WFKPALKLAE TGKPIGPSPA TLGRLGPLEV
RLAQTKQDVK RAQKLRYRVF YKDGTAIADA PTMLARRDKD AFDPICDHLL VVDHAAKPSL
SGKQPVVGTY RLLRQDVANR NGGFYTESEF DIGGLITRHP ELRFLELGRS CVLPPYRNKR
TVELLWHGIW TYVRQHGVDV MLGCASFDGT DPDRLALPLS FLHHYAPAPE AWRARAHPSR
YVEMNRLPKE AIDQKAALRE LPPLIKGYLR LGATIGEGAV IDYQFGTTDV LIILPVSAIS
ARYIEHFGAD ASRHAA
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