Gene Rpal_0310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0310 
Symbol 
ID6407956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp331758 
End bp332327 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content68% 
IMG OID642710220 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_001989346 
Protein GI192288741 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTTT ACAGCTCTTC GGCAGACGCC GGCCCGCCGG TCTGGCACGG CACCACCATT 
CTGACCGTGC GCAAGGGCGG CAAGGTCGTG ATCGGCGGCG ACGGCCAGGT CTCGATCGGC 
CAGACCGTGA TCAAGGCCAA CGCCAAGAAG GTCCGCAAGC TCGGCAAGGG CGACGTGATC 
GGCGGCTTCG CCGGCGCCAC CGCCGACGCC TTCACGCTGT TCGAGCGGCT CGAAGCCAAA 
CTCGAGCAGT ACCCCGGCCA GCTCACCCGG GCCGCCGTCG AACTCGCCAA GGACTGGCGC 
ACCGACCGCT ATTTGCGCCG GCTGGAAGCG ATGATGATCG TCGCCGACAA GGACGTGTCG 
CTGGTCCTGA CCGGCACCGG CGACGTGCTC GAGCCGGAGG CCGGCGTGAT GGCAATCGGC 
TCCGGCGGCA ATTATGCGCT GGCAGCCGCC CGGGCGCTGG CGGACACCGA CCAGGATGCC 
GAGACCATCG TCCGCAAGGC ACTCGGCATC GCCGCCGAGA TCTGCGTCTA CACCAACGGC 
AATCTTACCC TCGAGACGCT GACCGCATGA
 
Protein sequence
MALYSSSADA GPPVWHGTTI LTVRKGGKVV IGGDGQVSIG QTVIKANAKK VRKLGKGDVI 
GGFAGATADA FTLFERLEAK LEQYPGQLTR AAVELAKDWR TDRYLRRLEA MMIVADKDVS 
LVLTGTGDVL EPEAGVMAIG SGGNYALAAA RALADTDQDA ETIVRKALGI AAEICVYTNG 
NLTLETLTA