| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0288 |
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| Symbol | |
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| ID | 6407934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 306916 |
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| End bp | 307575 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710198 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_001989324 |
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| Protein GI | 192288719 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCG CAGCCAATCT GGCCGCGGTC GAGGCCGAAA TCGCCTGTGC CTGCAAGGAT
GCACGGCGCG AGCGCAGTGA GGTGACGCTG ATCGCAGTGT CGAAGACCTT CGAGGCGGAG
GCGATCCGCC CGGTGCTGTC GGCAGGCCAG CGCGTGTTCG GCGAAAACCG CGTGCAGGAA
GCCAAGGGTA AATGGCCGGC GCTGGTCGAC GAATACCCTG GCACCGAATT GCATCTGATC
GGACCGCTGC AGTCCAACAA GGCCAAGGAT GCTGTCGGGC TGTTCGGTGC GATCCATTCG
GTCGATCGTG ACAGCCTGTG CGAAGCCCTG AGCAAGGTGC TGCCGCAGGC TGGCCGAAAG
GTCGAACTGT TCGTTCAGAT CAACACCGGC GAGGAGCCGC AGAAGGCGGG CATCGCGCCG
CAGGATGCCG ATGCCTTTCT GGTCGCTTGC CGCGAGCGCT GGGGGCTGAC CATCAGCGGA
CTGATGTGCA TCCCACCGGT CGATGAAGCG CCGGCGCCGC ATTTCGCGCT ATGCGCGAAG
ATCGCCAAGC GCAATGGCCT TGCGAAGCTG TCGATGGGCA TGAGCGCCGA CTTCGCCACC
GCCATCCAAT TCGGCGCCAC CCATGTGCGG GTGGGGTCGG CGATCTTCGG GCATCGCTGA
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| Protein sequence | MSAAANLAAV EAEIACACKD ARRERSEVTL IAVSKTFEAE AIRPVLSAGQ RVFGENRVQE
AKGKWPALVD EYPGTELHLI GPLQSNKAKD AVGLFGAIHS VDRDSLCEAL SKVLPQAGRK
VELFVQINTG EEPQKAGIAP QDADAFLVAC RERWGLTISG LMCIPPVDEA PAPHFALCAK
IAKRNGLAKL SMGMSADFAT AIQFGATHVR VGSAIFGHR
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