Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0284 |
Symbol | |
ID | 6407930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 304067 |
End bp | 304879 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642710194 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_001989320 |
Protein GI | 192288715 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.27736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCTCA CGCTCACGAC TTGGAACATC AACTCGGTGC GGCTTCGCAT CGATCTGGTG GCGAAATTCC TCAAAGCCCA GCGCCCGGAC ATCCTGTGCC TGCAGGAGAC GAAGTGTCCG GACGATGCGT TTCCGCTGAA GCGGTTCAAG CGACTCGGCT ACGAGCATGT CGCGCTCAAC GGACAGAAGG GCTATCACGG CGTCGCGGTG ATTTCGAAAC TGCCGTTCGT CACCACCGAC ATCCGCACCT TCTGCGACAT CATCGACAGC CGCCACATCT CGGTCTCGGT GAAGACCGAC GAGAACGCGC CTCCGCTGGT ACTGCACAAT TTCTACGTTC CGGCCGGCGG TGATATTCCC GACCCAGCCG TTAATCCGAA GTTCAAGCAC AAGCTGTCGT TTCTCGACGA AATGAAAGCC TGCGAGCCGC TGCATCCGTC CGGCGATCAG CGGCACATTC TGGTCGGCGA CCTCAACGTG GCGCCGCACG AGCACGACGT CTGGTCGCAC AAACAACTTC TCAAGGTCGT GTCGCACACC CCGGTGGAGT GCGAGAAGCT GCTCGCGGTG CTACGCGCCG GCAACTGGGT CGACGTCGCG CGCGAGCGGA TCCCGCTCGA TCAGAAGGTC TATACATGGT GGAGCTATCG GGCTGCCGAT TGGACCGTCG GCGACCGCGG CCGGCGGCTC GACCACATCT GGGTCTCGGA AGCGCTGAAG GACCGCGTGG TCGACTTCAA GGTCCTGCGC GACGCGCGAA GCTGGGAGCG GCCGAGCGAC CATGTCCCGG TGACGATGAC GATGGAGCTG TAG
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Protein sequence | MRLTLTTWNI NSVRLRIDLV AKFLKAQRPD ILCLQETKCP DDAFPLKRFK RLGYEHVALN GQKGYHGVAV ISKLPFVTTD IRTFCDIIDS RHISVSVKTD ENAPPLVLHN FYVPAGGDIP DPAVNPKFKH KLSFLDEMKA CEPLHPSGDQ RHILVGDLNV APHEHDVWSH KQLLKVVSHT PVECEKLLAV LRAGNWVDVA RERIPLDQKV YTWWSYRAAD WTVGDRGRRL DHIWVSEALK DRVVDFKVLR DARSWERPSD HVPVTMTMEL
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