Gene Rpal_0284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0284 
Symbol 
ID6407930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp304067 
End bp304879 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID642710194 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_001989320 
Protein GI192288715 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.27736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTCA CGCTCACGAC TTGGAACATC AACTCGGTGC GGCTTCGCAT CGATCTGGTG 
GCGAAATTCC TCAAAGCCCA GCGCCCGGAC ATCCTGTGCC TGCAGGAGAC GAAGTGTCCG
GACGATGCGT TTCCGCTGAA GCGGTTCAAG CGACTCGGCT ACGAGCATGT CGCGCTCAAC
GGACAGAAGG GCTATCACGG CGTCGCGGTG ATTTCGAAAC TGCCGTTCGT CACCACCGAC
ATCCGCACCT TCTGCGACAT CATCGACAGC CGCCACATCT CGGTCTCGGT GAAGACCGAC
GAGAACGCGC CTCCGCTGGT ACTGCACAAT TTCTACGTTC CGGCCGGCGG TGATATTCCC
GACCCAGCCG TTAATCCGAA GTTCAAGCAC AAGCTGTCGT TTCTCGACGA AATGAAAGCC
TGCGAGCCGC TGCATCCGTC CGGCGATCAG CGGCACATTC TGGTCGGCGA CCTCAACGTG
GCGCCGCACG AGCACGACGT CTGGTCGCAC AAACAACTTC TCAAGGTCGT GTCGCACACC
CCGGTGGAGT GCGAGAAGCT GCTCGCGGTG CTACGCGCCG GCAACTGGGT CGACGTCGCG
CGCGAGCGGA TCCCGCTCGA TCAGAAGGTC TATACATGGT GGAGCTATCG GGCTGCCGAT
TGGACCGTCG GCGACCGCGG CCGGCGGCTC GACCACATCT GGGTCTCGGA AGCGCTGAAG
GACCGCGTGG TCGACTTCAA GGTCCTGCGC GACGCGCGAA GCTGGGAGCG GCCGAGCGAC
CATGTCCCGG TGACGATGAC GATGGAGCTG TAG
 
Protein sequence
MRLTLTTWNI NSVRLRIDLV AKFLKAQRPD ILCLQETKCP DDAFPLKRFK RLGYEHVALN 
GQKGYHGVAV ISKLPFVTTD IRTFCDIIDS RHISVSVKTD ENAPPLVLHN FYVPAGGDIP
DPAVNPKFKH KLSFLDEMKA CEPLHPSGDQ RHILVGDLNV APHEHDVWSH KQLLKVVSHT
PVECEKLLAV LRAGNWVDVA RERIPLDQKV YTWWSYRAAD WTVGDRGRRL DHIWVSEALK
DRVVDFKVLR DARSWERPSD HVPVTMTMEL