| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0278 |
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| Symbol | |
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| ID | 6407924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 296733 |
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| End bp | 298175 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710188 |
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| Product | ammonium transporter |
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| Protein accession | YP_001989314 |
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| Protein GI | 192288709 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.379824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTTCA AACGTCCCTA CGGCGCGGGA CTGGCGGTCC TTGCGGCCGG CATGTTCGCC
GCAACCGCGG CCTACGCCGA GCCAACGGTC AACAAGGGCG ACAACGCCTG GATGCTCACC
TCGACGGTGC TGGTGCTGTT GATGACCATC CCAGGCCTGG CGCTGTTCTA CGGCGGTCTG
GTCCGCTCCA AGAACATGCT CTCGGTGCTG GCGCAGGTGT TCTACACCGT GTGTATCGCC
TGCATTATCT GGGCTCTGTA CGGCTACAGC CTCGCCTTCA CCGGCGGTTC GGACTTCATC
GGCGGCTTCT CCAAGGCATT CCTCGCCGGC GTGACCACCG ACTCCAAGGC CGCGACCTTC
TCGGTCGACG CCAACATCTC GGAGCTGGTG TACGTCTGCT TCCAGATGAC CTTCTGCGCG
ATCACGCCCG CGCTGATCGT CGGCGCCTTC GCTGAGCGCA CCCGGTTCGC CGCCGTGGCG
CTGTTCATTC CGCTGTGGAT CACCCTGATC TACCTGCCGA TGGCCCACAT GGTCTGGTAC
TGGGCCGGTC CGGACGCGAT CAACGACGCC GCCAAGGCGC TCGCTGCCGC TGCCGACGAA
GCCGCCAAGA CCGCCGCGCA GGCCAAGCTC GACGAAGTCA ACGCCGACTC CGGCTTCCTG
TTCAAGAAGG GCGCGATCGA CTTCGCGGGC GGCACCGTGG TGCACATCAA CGCCGGTATC
GCCGGTCTGG TGGGCGCCCT GCTGGTCGGC CGTCGCACCG GCTACGGCAA GGAGCTGATG
GCCCCGCACT CGCTGACCAT GACCATGATC GGCGCCTCGC TGCTCTGGGT CGGCTGGTTC
GGCTTCAACG CCGGTTCGAA CCTCGAAGCT TCGGGCGGCG CTGCGCTCGC CATGACCAAC
TCCTTCGTCG CGACTGCGGC GGCGGCGCTG TCGTGGATGT TCGCCGAGTG GATCTTCAAG
GGTCATCCGT CGGTGCTCGG TGCGCTGTCG GGCGCCGTTG CCGGTCTGGT CGCGGTCACC
CCGGCTGCCG GCTTCTCCGG CCCGATGGGC GCGATCGTGC TCGGCCTGGT GGTCGGCGTG
GTCTGCCTGT TCTTCTGCAC CGTGGTGAAG AACGCGCTGA AGTATGACGA CTCGCTCGAC
GTGTTCGGCG TCCACGCGGT CGGCGGCATC GTCGGCGCGA TCGGCACCGG CATCCTGGTG
AACCCGGCTC TCGGCGGCAC CGGCGTGTAC GACTACGTGG CCGGCAAGGT CGGCGACTAC
GACATGACCA CCCAGCTGAT CTCGCAGTGC TGGGGCGTCG GCACCACCGT GCTGCTGTCC
GGCATCGGCT CGGCGATCCT CTATAAGGTC GTCGACGTGA TCGTCGGTCT GCGGGCCCCG
GTGGAAGTCG AACGCGAAGG CCTCGACCTC GTCGAGCACA CCGAGCGCGC TTACAACATG
TAA
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| Protein sequence | MTFKRPYGAG LAVLAAGMFA ATAAYAEPTV NKGDNAWMLT STVLVLLMTI PGLALFYGGL
VRSKNMLSVL AQVFYTVCIA CIIWALYGYS LAFTGGSDFI GGFSKAFLAG VTTDSKAATF
SVDANISELV YVCFQMTFCA ITPALIVGAF AERTRFAAVA LFIPLWITLI YLPMAHMVWY
WAGPDAINDA AKALAAAADE AAKTAAQAKL DEVNADSGFL FKKGAIDFAG GTVVHINAGI
AGLVGALLVG RRTGYGKELM APHSLTMTMI GASLLWVGWF GFNAGSNLEA SGGAALAMTN
SFVATAAAAL SWMFAEWIFK GHPSVLGALS GAVAGLVAVT PAAGFSGPMG AIVLGLVVGV
VCLFFCTVVK NALKYDDSLD VFGVHAVGGI VGAIGTGILV NPALGGTGVY DYVAGKVGDY
DMTTQLISQC WGVGTTVLLS GIGSAILYKV VDVIVGLRAP VEVEREGLDL VEHTERAYNM
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