Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0276 |
Symbol | |
ID | 6407922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 294716 |
End bp | 296047 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642710186 |
Product | ammonium transporter |
Protein accession | YP_001989312 |
Protein GI | 192288707 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTGT TGCTACGCCG CGCGGCGTCG GCCGCGACGG GCTACATTCT TGCAACATTC GGCCTTGCGG CAGTTGGCGT GACGCCGGCG CTGGCGCAGG GGATGGCCAC GGCGGCGCCG GGCATCAGCC CGGCCGACAC CGCCTGGATG ACGGTCGCCA CCGCCTTCGT GCTGATGATG ACCATCCCCG GCCTGGCGCT GTTCTACTCC GGCATGGTGC GCAAGAAGAA CGTGCTGGCC ACGATGGCCC AGAGCCTCGC GGCGGTGGCG TTGATTTCGA TCCTGTGGGT GGCGTTCGGC TATTCGCTCG CCTTCACCGG CAGCGGCAGC CTGATCGGCT CGTTCGACCG GATCTTCTTG GCCGGCATGA CCATGGACAG CGTCAATCCG GCGGCCAAGA CCATCCCGGA AGCGCTGTTC ATGCTCTACC AGATGACGTT TGCGGTCATC ACCGTGGCCC TGGTGGCCGG CTCGGTCGCC GACCGGATGC GGTTTTCCGC CTATCTGTTG TTCTCGATCG GCTGGTTCAT CTGCGTCTAT GTGCCGCTGG CGCATTGGAT CTGGGGCGGC GGCTTTTTGG GCGCAATGGG CGTGCTGGAC TTCGCCGGCG GCCTGGTGGT GCACCTGTCG GCCGGCACCG GAGGCCTGGT GGCGGCGATC GTGATCGGCC GCCGCCACGG CTACGGCATG GAAAACCTGT CGCCGTTCGA CCTGTCGCTG GCAGTGATCG GCACCGGCCT GTTGTGGGTC GGCTGGTTCG GCTTCAATGG CGGCTCCGCC CTGGCGGCAG ATTCCCGCGC GGTGTTCGCC ATCACGGCGA CGCATCTGGC CGCCTGCTCA GGCGCGCTGA CCTGGGGCGC AATCGAATGG ATGGCGCGGC GCAAGCCGTC GGTGCTGGGC ATGATTTCCG GTGCCGTCGC CGGCCTCGGC ACCATCACAC CGGCATCGGG CTATGTCGAA CCCTGGCACG GCGTGGTGAT CGGCATCGTC GCCGGCCTGA TCTGCTACTG GGCCTGCACT TGGCTGAAGC ACCGCCTGCG CTACGACGAC TCGCTCGACG TGTTCGGCGT CCACGGCATC GGCGGCCTGA CCGGCACGTT CCTGGCCGGC ATTTTCGCCA CGGCCTCGAT CGGTGGCGTC TCGGGCGCCC TCGAGGGCTC GTGGATGCAG CCGCTGACCC AGCTCGCCGG TATCCTGGTC ACCTTCGTAT GGTCCGCCGG GGCCACCTAT GTGCTGCTGA AGGCCGTCAG CCTGTTCGTG GCACTGCGCG TCTCCCGCGA GCACGAGATC GAAGGCCTGG ACATTTCGCA GCATGGCGAG GCGCTGCAGT AA
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Protein sequence | MTLLLRRAAS AATGYILATF GLAAVGVTPA LAQGMATAAP GISPADTAWM TVATAFVLMM TIPGLALFYS GMVRKKNVLA TMAQSLAAVA LISILWVAFG YSLAFTGSGS LIGSFDRIFL AGMTMDSVNP AAKTIPEALF MLYQMTFAVI TVALVAGSVA DRMRFSAYLL FSIGWFICVY VPLAHWIWGG GFLGAMGVLD FAGGLVVHLS AGTGGLVAAI VIGRRHGYGM ENLSPFDLSL AVIGTGLLWV GWFGFNGGSA LAADSRAVFA ITATHLAACS GALTWGAIEW MARRKPSVLG MISGAVAGLG TITPASGYVE PWHGVVIGIV AGLICYWACT WLKHRLRYDD SLDVFGVHGI GGLTGTFLAG IFATASIGGV SGALEGSWMQ PLTQLAGILV TFVWSAGATY VLLKAVSLFV ALRVSREHEI EGLDISQHGE ALQ
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