| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0273 |
|---|
| Symbol | |
|---|
| ID | 6407919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 292654 |
|---|
| End bp | 293487 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642710183 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001989309 |
|---|
| Protein GI | 192288704 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1647] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAC GACTCGTGAA AGCGACCAAT CAATGGATGC CCACCGCCAT GGCGTTCCAT
TGCTGCCGGA TACTCGCATC GCGCCCGCCG CGGGCCGAGG TCTCCGCGGC GGAGCAGGCC
GCCCTGGCAC AGGCGAGCCG GCTTTTCGAG CTGGATTGGA GCAACGACGC CGCCTGGAGC
TGGGGCTCCG GTCCAACGGT GGTGCTGATC CATGGTTGGG GTGGGCGCGC CGCCCAGATG
GCGCCCCTCG CGGTCGAGCT CGCGCGATCC GGACTGCGGG CGGTGGCGTT CGATGTCGCA
GGGCACGGCG AATCGGCCGA GCCGTCGGCA GGTTGGGAGT ACTCCATTCG CGACATCGCC
AAGGTTTCTC GTCAGCTTGG CTCCGTCGCC GGCTATGTTG GCCACTCGGC CGGCGGGCTG
TCGTTGATGG CAGCGCGGCG CATCCATGGC CTGTCACCGG CCAAATACGT CTGTGTTTGC
GCGCCGTCAC ATCCGTATCC CCCGGTGCGG GGCTTGGCGC AGCGGCTCGA TCCGCGGCCC
AGTGTGCTGC AGCGGTACCG AACTTATCTC GGTGCGCAAT TCCAGACCGA TTGGCGATCG
TTAGAAGCAG GCGCAGCGTA TCTGGGCGCC GGGGACGATC TGCTGCTCTG CTACGATCGC
AAGGATCGCT TCGTCGATCC TGACGATGGC AACCGCATCC ATGCGCTGTG TCCCGGCTCA
CGGCTGCTGA CGAGCGACGC CTACGGCCAC ACCCGCATTC TGCGCGCCAC CGAGGTGATG
CGCGAGATCG CCAAATTCCT GAACGACGAG GCCAGTCGTA TCGCCGCGGC CTGA
|
|---|
| Protein sequence | MLQRLVKATN QWMPTAMAFH CCRILASRPP RAEVSAAEQA ALAQASRLFE LDWSNDAAWS
WGSGPTVVLI HGWGGRAAQM APLAVELARS GLRAVAFDVA GHGESAEPSA GWEYSIRDIA
KVSRQLGSVA GYVGHSAGGL SLMAARRIHG LSPAKYVCVC APSHPYPPVR GLAQRLDPRP
SVLQRYRTYL GAQFQTDWRS LEAGAAYLGA GDDLLLCYDR KDRFVDPDDG NRIHALCPGS
RLLTSDAYGH TRILRATEVM REIAKFLNDE ASRIAAA
|
|---|
| |