Gene Rpal_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0224 
Symbol 
ID6407868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp243232 
End bp243750 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content67% 
IMG OID642710132 
Productsuperoxide dismutase copper/zinc binding 
Protein accessionYP_001989260 
Protein GI192288655 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2032] Cu/Zn superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.504945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTGC GAGCTTTGTT GTGCACCGGC GCGCTGCTCG GCGTCACCAC GGCGGCGATG 
GCGGCGGACA GCGCCAAGGC GACGCTGAAG AACGCCGAAG GCACCGAGAT CGGCACCGCG
ACGCTGACCG AGGGCAGCAA GGGCGTCACC ATCAAGCTGG CGCTGAAGGG ACTGCCGCCG
GGCGAACACG CCTTCCACAT CCACGCAGTC GGCAAATGCG AGCCGCCGTT CACCTCGGCA
GGCGGCCATT TCAATCCGGA GAACAAGAAG CACGGCAAGA TGGCCGAGGG CGGCGCCCAT
GCGGGCGATA TGCCGAACCT CGACGTGCCG GCCTCCGGCG CGCTGAGTAT CGACGTCGTC
AACGACGCGG TGACGCTCGC CAAGGGCAAG CCGAACTCGG TCTTCAAGGA CGGCGGCACC
GCGCTGGTGA TCCACGCCAA GGCCGACGAC TACAAATCAG ATCCCGCCGG GAACGCCGGC
GACCGCATCG CCTGCGGGGT GATCGAGGAA GCTAAGTAA
 
Protein sequence
MILRALLCTG ALLGVTTAAM AADSAKATLK NAEGTEIGTA TLTEGSKGVT IKLALKGLPP 
GEHAFHIHAV GKCEPPFTSA GGHFNPENKK HGKMAEGGAH AGDMPNLDVP ASGALSIDVV
NDAVTLAKGK PNSVFKDGGT ALVIHAKADD YKSDPAGNAG DRIACGVIEE AK