Gene Rpal_0209 details

Gene Information

• Locus tag: Rpal_0209
• ID: 6407853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 227541
• End bp: 229493
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642710117
• Product: acetyl-CoA synthetase
• Protein accession: YP_001989245
• Protein GI: 192288640
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02188] acetate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.237661
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGAGA AGATCTACGA CGTGCCCGCA GAGTGGGCGA GCCGCGCCTT CGTCGACGAC 
GCCAAATATC GCCAGATGTA CGAGCGCTCG GTCACGGATC CGACCGGATT CTGGGCGGAG 
CACGCCAAGC GCGTCGACTG GATCAAGGCG CCGACCAAGA TCGACAACTG GTCGTTCGCG 
CCCGGAAACG TTTCGATCAA GTGGTTCGAG GACGGCGTCC TCAACGCCGC CTACAACTGC 
ATCGACCGCC ACCTCGACAA GCGCGGCGAC CAGGTCGCGA TCATCTGGGA AGGCGACGAT 
CCTTCGCAGT CGCGCAGCAT CACCTATCGC GAGCTGCACG ACGAAGTCTG CAAGTTCGCC 
AACATCCTGC GCAACCGCAA TGTCGGCAAG GGCGACCGCG TCACCATCTA TCTGCCGATG 
ATTCCGGAAG CCGCGTTCGC GATGCTGGCC TGCGCCCGGA TCGGCGCGAT CCACTCGGTG 
GTATTCGCCG GCTTCTCGCC GGACAGCCTC GCGGGCCGCA TCAACGACTG CAACTCGAAG 
ATCGTCATCA CCGCCGACGA AGGCCTGCGC GGCGGCCGCA AGGTGCCGCT GAAGGCCAAT 
GTCGATGCGG CGCTGAAGAA GTGCGACGGC GTCGACTGGG TGATGGTGGT CAAACGCACC 
GGAGCCGCGG TCGAAATGGA TGACGTCCGC GACTTCTGGT ACCACGAAGC CGCCGAGGTG 
GTGACGACCG AGTGCCCGGT CGAGCACATG CATGCCGAAG ACCCGCTGTT CATCCTCTAC 
ACCTCGGGCT CGACCGGCCA GCCGAAGGGC GTGCTGCATA CCACTGGCGG CTATCTGGTG 
TTCGCCTCGA TGACGCACCA ATACGTCTTC GATTATCACG ACGGCGACAT CTACTGGTGC 
ACCGCCGACG TCGGCTGGGT CACCGGCCAC AGCTACATCC TGTACGGGCC GCTCGCCAAC 
GGCGCCACGA CGCTGATGTT CGAAGGCGTG CCGAACTATC CGACCAATTC CCGGTTCTGG 
GAAGTGATCG ACAAGCACAA GGTCAACATC TTCTACACCG CACCGACCGC GATCCGCGCG 
CTGATGCAGG CCGGCGACGA GCCGGTGAAG AAGACCTCGC GCAAGTCGCT CCGCCTGCTC 
GGCTCGGTCG GCGAGCCGAT CAATCCGGAA GCCTGGGAGT GGTACCACCG CGTCGTCGGC 
GAGGACCGCT GCCCGATCGT CGACACCTGG TGGCAGACCG AGACCGGCGG CATCCTGATC 
ACCCCGCTGC CCGGCGCCAC CAAGCTGAAG CCCGGCTCTG CGACCCGGCC GTTCTTCGGC 
GTGGTACCCG AGATCCTCGA TCCGGAAGGC AACGTTCTGG AAGGCGAATG CACCGGCAAC 
CTCTGCCTCG CCCGCTCCTG GCCGGGACAG ATGCGGACCG TGTACGGCGA CCATGCCCGA 
TTCGAGCAGA CCTACTTCTC GGCCTACAAG GGCAAGTACT TCACCGGTGA CGGCTGCCGG 
CGCGACGCCG ACGGCTTCTA CTGGATCACC GGCCGGGTCG ACGACGTCAT CAACGTCTCG 
GGTCACCGCA TGGGCACCGC CGAGGTCGAA TCCTCGCTGG TGGCGCATCC GAAGGTGTCC 
GAGGCGGCGG TGGTCGGCTA TCCGCACGAC ATCAAGGGCC AGGGCATCTA CGCCTATGTG 
ACCCTGATGG CCGGCGAAGA GCCGACCGAG GACCTGCGCA AGGAACTGGT CGCCTGGGTC 
CGCAAGGACA TCGGCCCGAT CGCCTCGCCC GACCTGATCC AGTTCGCGCC CGGCCTGCCC 
AAGACCCGCT CCGGCAAGAT CATGCGCCGA ATCCTACGCA AGATCGCGGA GGACGAACCG 
TCCTCGCTCG GCGACACCTC GACGCTGGCC GATCCCGCGG TGGTCGACGA TCTGGTCGAG 
CATCGCCAGA ACAAGCACCA CAAGGCGAGC TGA 

 

Protein sequence

MSEKIYDVPA EWASRAFVDD AKYRQMYERS VTDPTGFWAE HAKRVDWIKA PTKIDNWSFA 
PGNVSIKWFE DGVLNAAYNC IDRHLDKRGD QVAIIWEGDD PSQSRSITYR ELHDEVCKFA 
NILRNRNVGK GDRVTIYLPM IPEAAFAMLA CARIGAIHSV VFAGFSPDSL AGRINDCNSK 
IVITADEGLR GGRKVPLKAN VDAALKKCDG VDWVMVVKRT GAAVEMDDVR DFWYHEAAEV 
VTTECPVEHM HAEDPLFILY TSGSTGQPKG VLHTTGGYLV FASMTHQYVF DYHDGDIYWC 
TADVGWVTGH SYILYGPLAN GATTLMFEGV PNYPTNSRFW EVIDKHKVNI FYTAPTAIRA 
LMQAGDEPVK KTSRKSLRLL GSVGEPINPE AWEWYHRVVG EDRCPIVDTW WQTETGGILI 
TPLPGATKLK PGSATRPFFG VVPEILDPEG NVLEGECTGN LCLARSWPGQ MRTVYGDHAR 
FEQTYFSAYK GKYFTGDGCR RDADGFYWIT GRVDDVINVS GHRMGTAEVE SSLVAHPKVS 
EAAVVGYPHD IKGQGIYAYV TLMAGEEPTE DLRKELVAWV RKDIGPIASP DLIQFAPGLP 
KTRSGKIMRR ILRKIAEDEP SSLGDTSTLA DPAVVDDLVE HRQNKHHKAS