Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0190 |
Symbol | |
ID | 6407834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 208301 |
End bp | 208915 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642710100 |
Product | lipolytic protein G-D-S-L family |
Protein accession | YP_001989228 |
Protein GI | 192288623 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00452588 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCGC TGCCTGGACA AACCGCGCGG GCCGAGACGG CCGCCAAGCC GCTGAAGCTG GTGGTGCTCG GGGACTCGCT GACCGCCGGC TACGGCCTGC CGGCCGCCGA TGCGTTTCCG GCCAAGCTGC AAAAGGCACT CAAGGCCAAA GGCATCGACA CCGAGATGGT GAACGCTGGC GTATCCGGTG ATACCGCCAG CGGCGGCCTG CAGCGGCTCG ACTGGTCGGT CCCCCCTGAT GCGGACGCGG TCATCGTCGA GCTCGGCGCC AACGATGCGC TGCGCGGCAC CGATCCGAAG GTCCCGCGCA AGGCGCTGGA CGAGATCTTG AAGCGGTTGA AGGCGCGCAA TCTGCCGGTG CTGCTCGCCG GCATGCTGGC GCCGCCGAAT TACGGCAAAG ACTACGCCGC GCAGTTCGAC GCGATCTATC CGGACCTTGC CAAGCAGTAC GACGTGCCGC TGTATCCGTT CTTCCTCGAC GGCGTCGCGG CGGTGTCGAA TCTCAATCAG GCCGACGGCA TCCATCCGAC CGCGGCCGGC GTCGACATCA TCGTCGAGCG GATTTTGCCC AAGGTTGAGG CGCTGCTTCG CCCGCTCCTG GTGCAGAGCC GCTGA
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Protein sequence | MAALPGQTAR AETAAKPLKL VVLGDSLTAG YGLPAADAFP AKLQKALKAK GIDTEMVNAG VSGDTASGGL QRLDWSVPPD ADAVIVELGA NDALRGTDPK VPRKALDEIL KRLKARNLPV LLAGMLAPPN YGKDYAAQFD AIYPDLAKQY DVPLYPFFLD GVAAVSNLNQ ADGIHPTAAG VDIIVERILP KVEALLRPLL VQSR
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