| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0171 |
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| Symbol | |
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| ID | 6407815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 185139 |
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| End bp | 186569 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642710081 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_001989209 |
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| Protein GI | 192288604 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.132088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACAC CCGCCAATCA GACCGGACGC ATCACGCAGG TCATCGGCGC CGTCGTCGAC
GTTCAGTTCG AAGGGCACCT GCCGGCCATT CTGAACGCCA TCGAAACCAA GAACGGCGAC
AACCGCTTGG TGCTCGAAGT TGCGCAGCAT CTTGGTGAAT CGACCGTCCG CACCATCGCG
ATGGACACCA CCGAAGGTCT GGTCCGCGGC CAGGAAGTCA CCGACACCGG TGCGCCGATC
TCGGTACCGG TCGGCGCCGG CACGCTCGGC CGCATCATGA ACGTGATCGG CGAGCCGGTC
GACGAGCAGG GCCCGATCAA GTCGGAAGGC CTCCGCGCCA TCCACCAGGA AGCGCCGGCC
TACACCGACC AGTCGACCGA GGCTGAAATT CTCGTCACCG GCATCAAGGT CGTCGATCTG
CTGGCGCCTT ACGCCAAGGG CGGTAAGATC GGCCTGTTCG GCGGCGCCGG CGTCGGCAAG
ACCGTGCTGA TCCAGGAACT GATCAACAAC GTCGCCCGCG CTCACGGCGG TTACTCGGTG
TTCGCCGGCG TCGGCGAGCG TACCCGCGAA GGTAACGACC TCTATCACGA GTTCATTGAA
TCCGGCGTCA ACAAGAAGGG CGGCGGCGAG GGTTCGAAGT GCGCGCTGGT GTACGGCCAG
ATGAACGAAC CGCCGGGCGC TCGCGCTCGC GTCGGTCTGA CCGGTCTGAC CGTCGCCGAG
CACTTCCGCG ATCAGGGCCA GGACGTGCTG TTCTTCGTCG ACAACATCTT CCGCTTCACC
CAGGCGGGTT CGGAAGTGTC GGCGCTGCTC GGCCGTATCC CGTCGGCGGT GGGTTATCAG
CCGACGCTCG CGACCGACAT GGGCGCGCTG CAAGAGCGCA TCACCACCAC CACCAAGGGC
TCGATCACCT CGGTGCAGGC GATTTACGTG CCGGCCGACG ACTTGACCGA CCCGGCGCCC
GCGACCTCGT TCGCGCACTT GGACGCGACC ACCGTGCTCA ATCGAGCGAT CTCTGAAAAG
GGCATCTACC CGGCGGTGGA TCCGCTCGAC TCGACCTCGC GCATGCTGTC CGCCTCGATC
GTCGGCGAAG AGCACTACAA CACCGCGCGT ATGGTTCAGC AGATCCTGCA GAAGTACAAG
TCGCTGCAGG ACATCATCGC GATCCTGGGC ATGGACGAAC TGTCCGAAGA GGACAAGCTC
ACCGTGGCTC GCGCCCGTAA GATCGAGCGC TTCCTGTCGC AGCCGTTCTT CGTCGCCGAA
GTGTTCACCG GCTCGCCGGG CAAGTTCGTC GACCTCGCCG ACACCATCAA GGGCTTCCGC
GCGATCTGCG AAGGCAAGTA CGACCATCTG CCGGAAGCGG CGTTCTACAT GGTCGGCACC
ATCGAAGAGG CGGTCGAGAA GGGTAAGAAG CTCGCCGCCG AGGCGGCCTG A
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| Protein sequence | MATPANQTGR ITQVIGAVVD VQFEGHLPAI LNAIETKNGD NRLVLEVAQH LGESTVRTIA
MDTTEGLVRG QEVTDTGAPI SVPVGAGTLG RIMNVIGEPV DEQGPIKSEG LRAIHQEAPA
YTDQSTEAEI LVTGIKVVDL LAPYAKGGKI GLFGGAGVGK TVLIQELINN VARAHGGYSV
FAGVGERTRE GNDLYHEFIE SGVNKKGGGE GSKCALVYGQ MNEPPGARAR VGLTGLTVAE
HFRDQGQDVL FFVDNIFRFT QAGSEVSALL GRIPSAVGYQ PTLATDMGAL QERITTTTKG
SITSVQAIYV PADDLTDPAP ATSFAHLDAT TVLNRAISEK GIYPAVDPLD STSRMLSASI
VGEEHYNTAR MVQQILQKYK SLQDIIAILG MDELSEEDKL TVARARKIER FLSQPFFVAE
VFTGSPGKFV DLADTIKGFR AICEGKYDHL PEAAFYMVGT IEEAVEKGKK LAAEAA
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