| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0110 |
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| Symbol | |
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| ID | 6407753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 121366 |
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| End bp | 122574 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642710019 |
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| Product | putative ABC transporter, substrate-binding protein; putative branched-chain amino acid transporter |
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| Protein accession | YP_001989148 |
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| Protein GI | 192288543 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.64006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCA TGGACCGCCG CTGCTTTCTG CTCGGCACCG CTACCACCAT GCTGGTGGCG
ACATCGATGA AAGCGCAGGC CGCCGACACC ACCGGCATCA CGCCGACCAG CATCCGCATC
GGCAGCACCT CGCCGCAGAG CGGTCCAGTG TCGGCCTATG GGGTGCAGGC GCGTTGCCAG
GCCGCATATT TCAAGATGAT CAACGATCGC GGCGGCATCG CCGGGCGCAA GATCGACTTC
ATCTATTACG ACGACGCCTT CAATCCGGCC AAGACCGTGG AGCAGACCCG CAAGCTCGTC
GAGAGCGACG AGGTCGCGCT GCTGTTCAGC AATCTCGGCA CCGCGACCAA TTCGGCGATC
GTCAAATACG CCAACGCCAA GAAGATCCCG CATCTGTTTC TGTCGGTGAA CGGCGACAAA
TGGAGCGACT ACAAGGCGCA TCCGTGGAGC ATCGGCTTCG CGCCGAGCGC GCGCACCGAG
GCGGCGATCT TCGTCAAGCA CATGCTGGCG GAGAAGCCGG ACGCGAAGTT CGCGGTGCTG
TATCAGAACG ACGATTTCGG CAAGGACTTC GTGCTCGGTG CCAAGGATGT GCTGGGCGAT
CGCGAGTCGC GCCAGCTCGT GACCATCTCG CACGAGACCT CCGATCCGAC GATCGATTCC
CAGATCCTGC AGCTGCGTGC CGCCGCGCCG GATGCCCTGA TCTCCGGCAC CACCGCGAAG
TTCACCGCAC AGGCGATCCG CAAGGTGGCG GAGACGCGCT GGCAGGTCCG CCACTACATC
ACCGGCGGCT CGTCGTCCTA TGCGGGCACG ATCGGCCCGG CCGGTCCCGA GAACGCGGTC
GGCGTGATCT CGTCGGCCTA TCTCAAGGAT GTCGCCGATC CGGCCTGGAA GGACGATCAG
GGCATCAAGG ATTTCCTCGC CTTCATGCAG AGCTACTTCC CGGAAGGCAA CAAGGATGAT
TTCTACAATC TCTACGCCTA TACGGTGGCT TCCGCGCTCG TGAAGGTGCT GACGCAGTGC
GGCGACGGCT GGACGCGCGA AAACATCATG GCACAGGCGA CTAATTTGAA GGACGTCGAG
CTGCCGACGT TGCTGCCCGG CATCCGCGTC AACACCAGCC CGACCGACTA TCGGCCGCTG
ACACAAGTGC AGCTGCAGAA ATGGGACGGC AAGGCCTGGG TGCGGTTCGG CGACGTGCTG
GGCGCGTAG
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| Protein sequence | MTAMDRRCFL LGTATTMLVA TSMKAQAADT TGITPTSIRI GSTSPQSGPV SAYGVQARCQ
AAYFKMINDR GGIAGRKIDF IYYDDAFNPA KTVEQTRKLV ESDEVALLFS NLGTATNSAI
VKYANAKKIP HLFLSVNGDK WSDYKAHPWS IGFAPSARTE AAIFVKHMLA EKPDAKFAVL
YQNDDFGKDF VLGAKDVLGD RESRQLVTIS HETSDPTIDS QILQLRAAAP DALISGTTAK
FTAQAIRKVA ETRWQVRHYI TGGSSSYAGT IGPAGPENAV GVISSAYLKD VADPAWKDDQ
GIKDFLAFMQ SYFPEGNKDD FYNLYAYTVA SALVKVLTQC GDGWTRENIM AQATNLKDVE
LPTLLPGIRV NTSPTDYRPL TQVQLQKWDG KAWVRFGDVL GA
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