| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0087 |
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| Symbol | |
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| ID | 6407730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 96707 |
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| End bp | 97582 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642709996 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001989125 |
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| Protein GI | 192288520 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAAC TCCCCGAAGT CGAAACCGTC CGCCGCGGGC TGCAGCCGGC GATGGAGGGC
TTTCGGATCG ACCGCGCGGT GGCGCACCGG GAGAACCTGC GGTTTCCGCT GCAGAAGGAC
TTCGCCGCCC GGCTCACCGG CCAGACCGTC ACCGGGCTCG GCCGGCGTGC CAAATATCTG
CTGGCGGACC TGTCGAGCGG CGACGTGCTG CTGATGCATC TCGGGATGTC CGGCTCGTTC
CGGGTGATCG GGGCCGATGG CGAGACCACG CCGGGCGAGT TTCACTATCC GCGCAGCGAG
GACCGCACCC ACGATCACGT GGTGTTCGAA ATGGCGTCCG GCGCCCGCGT CGTGTTCAAC
GATCCGCGCC GGTTCGGCTT CATGAAGGTG TTTCCGCGCA GCGAGATCGA AACCGAGCCG
CACCTGAAGG GCCTCGGTCC CGAGCCGCTC GGCAACGCGT TCGACGCCAG CCTGCTGGCG
AAGGCCTGCG CCGGCAAGCA AACCAGCCTC AAGGCCGCGC TGCTCGATCA GCGCGTGGTT
GCCGGGCTCG GCAACATCTA TGTTTGCGAG GCGCTGTTTC GCGCGCACCT GTCACCAAAG
CGCAAAGCCT CGACGCTGGC CAATCGCAAG GAAGAGCCGA CCGACCACGC GGTGCGGCTG
ACCGAGGCGA TCCGCGAGGT GCTGGGCGAA GCGATCAAGG CCGGCGGCTC ATCGCTCCGC
GACCACCGCC AGACCAGCGG TGAGCTCGGT TACTTCCAGC ACGCGTTCAA GGTGTACGAC
CGCGAAGGCA AGCCGTGCCC GACCTGCGGC GGCACGGTGC AACGCTTCGT GCAGAACGGC
CGGTCGACGT TCTGGTGCCC GAAGTGCCAG AAGTGA
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| Protein sequence | MPELPEVETV RRGLQPAMEG FRIDRAVAHR ENLRFPLQKD FAARLTGQTV TGLGRRAKYL
LADLSSGDVL LMHLGMSGSF RVIGADGETT PGEFHYPRSE DRTHDHVVFE MASGARVVFN
DPRRFGFMKV FPRSEIETEP HLKGLGPEPL GNAFDASLLA KACAGKQTSL KAALLDQRVV
AGLGNIYVCE ALFRAHLSPK RKASTLANRK EEPTDHAVRL TEAIREVLGE AIKAGGSSLR
DHRQTSGELG YFQHAFKVYD REGKPCPTCG GTVQRFVQNG RSTFWCPKCQ K
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