| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0073 |
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| Symbol | trpA |
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| ID | 6407716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 76080 |
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| End bp | 76916 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642709982 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001989111 |
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| Protein GI | 192288506 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0126825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCC GCATCGACAC CCGCTTCGCT GATCTGAAGC AGCAGGGCCG GCCGGCACTC
GTCACCTTCG TGATGGCGGG CGATCCCGAT CTCGACACCT CGCTGCAGAT CCTCAAGGCT
CTGCCGGCTG CAGGCGCCGA CGTGATCGAG ATCGGCATGC CGTTCACCGA CCCGATGGCG
GATGGTCCGG CGATCCAGGC CGCCGGCCTG CGCGCGTTGA AAGCCGGCAC CACGCTGAAG
AAGACGCTGG GGCTGGTCCG CGACTTCCGC GCCACCGACA ATGCCACCCC GCTGGTGCTG
ATGGGGTATT ACAACCCGAT CTACATCTAC GGCGTCGATG CCTTCCTGGC GGATGCCAAG
GCGGCCGGCG TCGACGGCCT GATCATCGTC GACCTGCCGC CCGAAGAGGA CGAAGAGCTG
TGCTTGCCGG CGATGAAGGC CGGGCTCAAC TTCATCCGCC TCGCCACCCC GACCACCGAC
GAAAAGCGGT TACCGGCGGT GCTCGCCAAC ACTTCGGGCT TCGTCTATTA CGTCTCGATC
ACCGGCATCA CCGGATCGGC CTCGGCGGAT GCCTCGGCGG TCGGCGCCGC GGTGCAGCGG
ATCAAGCGTC ACACCAACCT GCCGGTCTGC GTCGGCTTCG GCATCCGTAC GCCGGATGCG
GCGCAGGCGA TCGCCGCGCA GGCGAACGGC GCGGTGGTGG GCTCGGCGCT GATCGATGCG
CTCAAGGCCA GCCTCGACGC CGAAGGCCGC GCCACCAAGG GCACGGTCGG TGCGGTGGCG
GATCTGGTCG CCTCGCTCGC GGCCGGCGTT CGCGGTGCGA AACAGGCTGC GGAATAG
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| Protein sequence | MTTRIDTRFA DLKQQGRPAL VTFVMAGDPD LDTSLQILKA LPAAGADVIE IGMPFTDPMA
DGPAIQAAGL RALKAGTTLK KTLGLVRDFR ATDNATPLVL MGYYNPIYIY GVDAFLADAK
AAGVDGLIIV DLPPEEDEEL CLPAMKAGLN FIRLATPTTD EKRLPAVLAN TSGFVYYVSI
TGITGSASAD ASAVGAAVQR IKRHTNLPVC VGFGIRTPDA AQAIAAQANG AVVGSALIDA
LKASLDAEGR ATKGTVGAVA DLVASLAAGV RGAKQAAE
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