| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0064 |
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| Symbol | |
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| ID | 6407707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 67223 |
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| End bp | 68560 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642709973 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001989102 |
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| Protein GI | 192288497 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.219088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTGATT CGAACCAGCC GACGCCGCTG CAGGCGCGCA AGAGCGGCGC ATTGCATGGC
ACCGCGCGCG TCCCAGGCGA CAAGTCGATT TCGCACCGGG CGCTGATTCT CGGCGCGCTG
GCGGTCGGCG AGACCCGAAT CTCCGGCTTG CTCGAGGGCG AAGACGTCAT CAACACCGCC
AAAGCGATGC GCGCGCTCGG TGCCAAGGTC GAGCGCACCG GCGACTGCGA ATGGCGCGTG
CATGGCGTCG GCGTTGCAGG CTTTGCGACG CCGGAGGCCC CGCTGGATTT CGGCAATTCG
GGCACCGGCT GCCGTTTGGC GATGGGCGCG GTGGCCGGAT CGCCTATTGT GGCGACTTTC
GACGGCGATG CATCGCTGCG CAGCCGGCCG ATGCGGCGAA TCGTCGATCC CTTGGAGCTG
ATGGGTGCCA AGGTGGTGTC GAGCAGCGAG GGCGGCCGAT TGCCGCTGGC CCTGCAGGGC
GCCCGCGATC CGCTGCCCAT TCTTTACCGC ACCCCCGTGC CGTCGGCGCA GATCAAATCC
GCCGTGCTGC TCGCCGGCCT GTCGGCACCC GGCGTCACCA CCGTGATCGA GGCCGAAGCC
AGCCGCGACC ATACCGAGCT GATGCTGCAG CATTTCGGCG CCACGATCGT CACCGAAGCC
GAAGGTGCCC ATGGCCGTAA GATTTCATTA ACCGGCCAGC CCGAATTGCG CGGCGCCCCG
GTTGTGGTGC CGGCCGATCC GTCTTCGGCG GCCTTTCCGA TGGTCGCGGC GCTGGTGGTG
CCCGGCTCCG ATATCGAATT GACCGACGTG ATGACCAACC CGCTGCGCAC GGGGTTGATC
ACGACGCTGC GCGAAATGGG CGCCTTGATC GAGGACAGCG ACGTCCGGGG CGATGCCGGG
GAGCCGATGG CCCGGTTCCG GGTGCGCGGT TCGAAGCTCA AAGGCGTCGA GGTGCCGCCG
GAACGGGCGC CGTCGATGAT CGACGAATAT CTGGTGCTGG CGGTCGCCGC TGCGTTCGCC
GAAGGCACCA CCGTGATGCG CGGCCTCCAC GAACTGCGGG TCAAGGAAAG CGACCGGCTG
GAAGCGACGG CGGCGATGCT GCGGGTCAAT GGCGTCGCGG TCGAGATCGC AGGCGACGAT
CTGATCGTCG AGGGTAAGGG CCATGTGCCG GGCGGCGGTG TGGTCGCCAC CCACATGGAT
CATCGCATCG CGATGTCGGC TCTCGCCATG GGCCTCGCCT CGGACAAGCC GGTGACGGTC
GATGACACCG CCTTCATCGC CACCAGCTTC CCGGACTTCG TTCCGATGAT GCAGCGGCTC
GGCGCGGAAT TCGGCTGA
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| Protein sequence | MTDSNQPTPL QARKSGALHG TARVPGDKSI SHRALILGAL AVGETRISGL LEGEDVINTA
KAMRALGAKV ERTGDCEWRV HGVGVAGFAT PEAPLDFGNS GTGCRLAMGA VAGSPIVATF
DGDASLRSRP MRRIVDPLEL MGAKVVSSSE GGRLPLALQG ARDPLPILYR TPVPSAQIKS
AVLLAGLSAP GVTTVIEAEA SRDHTELMLQ HFGATIVTEA EGAHGRKISL TGQPELRGAP
VVVPADPSSA AFPMVAALVV PGSDIELTDV MTNPLRTGLI TTLREMGALI EDSDVRGDAG
EPMARFRVRG SKLKGVEVPP ERAPSMIDEY LVLAVAAAFA EGTTVMRGLH ELRVKESDRL
EATAAMLRVN GVAVEIAGDD LIVEGKGHVP GGGVVATHMD HRIAMSALAM GLASDKPVTV
DDTAFIATSF PDFVPMMQRL GAEFG
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