| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0058 |
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| Symbol | |
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| ID | 6407700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 61193 |
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| End bp | 62041 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642709966 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001989096 |
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| Protein GI | 192288491 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGAGC GCCGGAAGTT CGGAAACCTG GTGCCGCACC TGATCCTGTG GATCGGCGTC
GCGATCGTTG CCTTCCCGGT CTATCTGGCG TTCGTCGCCT CGACCCAGGA CAACGCCACC
ATCGCCAATG GCCAGATGTC GCTGCTACCC GGCAGCCATT TCCTGGAAAC CTACTACAAG
ACCATCTTCG TCGGCTCCTC CGGCACCACG CGGGAGCCGG TCGCCAGCAT GCTGTTCAAC
TCGTTCGTGA TGGCGATGTC GATCGCACTT GGCAAGATCG CGATCTCGAT CATCTCCGCC
TACGCGATCG TGTACTTCCG GTTTCCGTTC CGGATGACGA TCTTCTGGAT CATCTTCATC
ACGCTGATGC TGCCGGTCGA GGTCCGGATC TATCCGACCT ACAAGATCGC CGCCGACCTT
AATCTGCTGG ATAGCTACGC CGGGCTGGCG CTGCCGCTGA TCGCGTCGGC AACCGCGACG
CTGCTGTTCC GGCAGTTCTT CATGACGGTG CCGGACGAGC TGTTGGAGGC GTCGCGGATC
GACGGCGCTG GGCCGCTGCG GTTCTTCTGG GATACGCTGC TGCCGCTGTC GCGCACCAAT
ATGGCGGCGC TGTTCGTGAT CCTCTTCATC CTCGGCTGGA ATCAATATCT CTGGCCGCTG
CTGATCACCA CGCGTGACGA CATGCAGACC ATCCAGATCG GCATCCGCAA AATGATTGTC
ACCTCGGATG CGCTGACCGA ATGGCCGATC GTGATGGCGA CCGCGGTGCT GGCGATGCTG
CCGCCGGTCG CCGTGGTGGT GCTGATGCAG AAGCTGTTCG TGCGCGGACT GGTCGAGACG
GAGAAGTAA
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| Protein sequence | MVERRKFGNL VPHLILWIGV AIVAFPVYLA FVASTQDNAT IANGQMSLLP GSHFLETYYK
TIFVGSSGTT REPVASMLFN SFVMAMSIAL GKIAISIISA YAIVYFRFPF RMTIFWIIFI
TLMLPVEVRI YPTYKIAADL NLLDSYAGLA LPLIASATAT LLFRQFFMTV PDELLEASRI
DGAGPLRFFW DTLLPLSRTN MAALFVILFI LGWNQYLWPL LITTRDDMQT IQIGIRKMIV
TSDALTEWPI VMATAVLAML PPVAVVVLMQ KLFVRGLVET EK
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