| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0050 |
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| Symbol | |
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| ID | 6407692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 54394 |
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| End bp | 55344 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642709958 |
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| Product | ABC transporter related |
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| Protein accession | YP_001989088 |
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| Protein GI | 192288483 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.161692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCGTC GGCGCGGCCC GAAAGCTCCC GGGTTTGGCG GCGCGCGGAA CGATATCACC
GGCTACGGCA ACGAGGTCGG CGATCTGCTC ACCACGCCAG TGCGCGACGC ACCGCCGATC
GCCCGCAGCG ACGCCTATGC GACGCCGCAG CGACAACCGG CCGCGGCTGC GCCGCCGCGC
CGCGCCGCCG CCGCGGCGCA ATCGGCAGCG CCACAAGCCG TGCCGGCATC CAGTTACTTG
GCGGTGCACA GCGTCGAGAA GAGTTTCGGC ACCCGCAAGA TCGTACGCGG TGTCAGCATC
TATGTTCGCC GCGGCGAAGC GGTCGGGCTG CTCGGCCCCA ACGGCGCCGG CAAAACCACC
GTGTTCTACA TGATCACCGG CTTGATCAAG GCCGATAACG GCGCGATCGA ACTCGACGGC
CACGACGTCA CCAAGCTGCC GATGTATCAG CGTGCCCGCC TCGGTATCGG TTACCTGCCG
CAGGAAGCCT CGATCTTCCG CGGCCTTACC GTCGAGCAGA ACATCCGCGC GGTGCTGGAA
GCGGTCGAAC CGGACAAGCG CAAGCGCGAA GCCCAGCTCG ACAATCTGCT GCAGGAATTC
AACATCGAAC GCTTGCGCAA GTCGCCGTCG ATCGCACTGT CGGGCGGTGA GCGTCGCCGC
GTCGAAATCG CCCGCGCGCT CGCCAGCCGC CCGAACTACA TGCTGCTCGA CGAGCCGTTC
GCCGGTATCG ACCCGATCGC GGTCGGCGAC ATTCAGGACC TAGTGCGGCA TCTGACCAAT
CGCGGCATCG GCGTGCTGAT CACCGATCAC AACGTCCGCG AAACGCTGGG CCTGACCGAT
CGCGCCTACA TTGTCTATGC GGGCGAGATC CTGACTGAGG GCACGCCCGA AGAGATCGTC
AACGACCCGG ACGTGCGCCG GCTTTACCTT GGCGAGGAAT TCCGGCTGTG A
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| Protein sequence | MFRRRGPKAP GFGGARNDIT GYGNEVGDLL TTPVRDAPPI ARSDAYATPQ RQPAAAAPPR
RAAAAAQSAA PQAVPASSYL AVHSVEKSFG TRKIVRGVSI YVRRGEAVGL LGPNGAGKTT
VFYMITGLIK ADNGAIELDG HDVTKLPMYQ RARLGIGYLP QEASIFRGLT VEQNIRAVLE
AVEPDKRKRE AQLDNLLQEF NIERLRKSPS IALSGGERRR VEIARALASR PNYMLLDEPF
AGIDPIAVGD IQDLVRHLTN RGIGVLITDH NVRETLGLTD RAYIVYAGEI LTEGTPEEIV
NDPDVRRLYL GEEFRL
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