| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0044 |
|---|
| Symbol | |
|---|
| ID | 6407685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 48873 |
|---|
| End bp | 49565 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642709951 |
|---|
| Product | Glutathione S-transferase domain |
|---|
| Protein accession | YP_001989082 |
|---|
| Protein GI | 192288477 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACACCC TATTCCACCA CCCGTTCTGC CCGCTGTCGC GGTTCATCCG CCTTGCGCTC
GGCGAACACG GTCTCGATCT CAGGTTGGTG GAGGAGCGGT CCTGGGAACG GCGAACGGCC
TTCCTGGCGC TCAACCCGGC GGGAACCACG CCGGTCCTGG TTGCAGAAGG GCGCCCCCCG
ATTCCCGGCG CCGGTGTGAT CGTCGAGTTC CTCGACGAAG TGCACGGCGT CGAAATGGGT
GACCGGCGGC TGCTGCCGCA GTCCACCGCC GAGCGCATCG AGGTGCGGCG GCTGCTATCG
TGGTTCAACG ACAAGTTCTT TGAAGAAGCT TCCGGCCCGC TGATGACCGA GCGCATCTAC
AAGCGCTTCA TGAGCGAGGA GGACGGCGGC GGCCCGCCGG CGATGGATGT GATTCGTGCC
GCCAACGCCA ATGTGCGCTA CCATCTCGCC TATATCGGCT GGCTGGCGCG CACCCGGAAC
TTTCTCGCCG GCGATCGCAT GACCTATGCG GATCTCGCCG CCGCGGCGCA CCTGTCGGCG
ATCGATTATC TGGGCGACGT GCCATGGATC GAGGACGAGG CGGCAAAGGC CTGGTACGCG
CGGATCAAAT CGCGCCCCTC GTTCCGTCCG CTGCTGAGCG AATGGCTCGC GGGCGTACCG
GCGTCGCGGA CCTACGTGGA CCTGGATTTC TGA
|
|---|
| Protein sequence | MYTLFHHPFC PLSRFIRLAL GEHGLDLRLV EERSWERRTA FLALNPAGTT PVLVAEGRPP
IPGAGVIVEF LDEVHGVEMG DRRLLPQSTA ERIEVRRLLS WFNDKFFEEA SGPLMTERIY
KRFMSEEDGG GPPAMDVIRA ANANVRYHLA YIGWLARTRN FLAGDRMTYA DLAAAAHLSA
IDYLGDVPWI EDEAAKAWYA RIKSRPSFRP LLSEWLAGVP ASRTYVDLDF
|
|---|
| |