Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0035 |
Symbol | |
ID | 6407676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 38980 |
End bp | 40437 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642709942 |
Product | amine oxidase |
Protein accession | YP_001989073 |
Protein GI | 192288468 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1231] Monoamine oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATTT CGCGACGCAG CCTGCTCGAG GGGTTGCTCG GCGCCACTGC CGGGCTTGCG TTGCTGCCCG TGTTGGGCGG GCGGGCGAAC GCCGCTCTGC CGCGCGAGGC GGAGGTCGTG GTGGTCGGCG CCGGCGCCGC CGGGATCGCG GCGGCGCGGC GGATCGTGGC GGCCGGCCGC AAGGTAATCG TGGTCGAGGC CGCCTCGGAG ATCGGCGGCC GCTGCGTCAC CGATACCACC AGTTTCGCAG CCCCTTTCGA CCGCGGCGCG CGCTGGCTGC ACAACCCCGA CAGCAACCCG CTGGTCCGGC TGGCGCGCAG CTCCGGCTTT GCGGTGACAC CTGTCGCCCC CGGCCAGAAG GTCAGGATCG GACGCCGCAA CGCCCGTTCG CGCGAGACCG AGGATTTTCT GGCGGCCTTC GTCCGTGCCA GCCGCGCCAT CAGCGATGCG TCACGCGGCA AGTCCGATAT TTCCTGCGCG GCCGCGCTGC CGAACGATCT CGGTGATTGG GCGGCGACGA TCGAATATGT GCTGGGCCCT GCGACCACCA GCAAGGACCT GCGCGCGCTG TCGGCGATGG ACGCGGTGCG GACGCTGGAC CGCACCGCGC TGCTCGGCTG CCCGCAGGGC GTCGGCAGTC TGCTGACTCA GCTCGCCTCT TCGCTGCCGA TTGCACTGTC GACCCCGGTG AAGCGGATCG TGTGGAGCGG GCGCGATCTC GCGGTCGAAA CCGCGGCCGG CCGGATCGGT GCGCGCGCCA TCATCGTCAC CGCGTCGACC AATGTGCTGA CCTCGGGCAA TCTGGGGTTC TCCCCCGAAC TGCCGAAACG GCAGCTCGAC GCCGCAGCAC GGCTGAGCCT CGGCAGCATC GACCGCATCG CGCTGCAGTT CAAAGGTAAC CCGCTCGGGC TGTCGCGCGA CGAGACCATC ATCGAACGCG CCGACGACAT CCGCACCGCG ACGCTGGTGG GCAATATCGG CGGTACCTCG CTGTGCACGG TCGACGTCGC CGGCTCGTTC GGGCGCCAGC TCGCCGCGCA GGGCGAAGCC GCGATGCAGG ATTTCGCGAT CGAATGGCTG GGCAAGCTGT TTGGCAGCGA CATCGCAGGC GCGGTCGAAC GCAAGGCGGT GACGCGCTGG AACGAGATGC CTTACGTGCT GGGCGCGATG TCGGCGGCGG AGCCCGGCGG CCAGCCGTCG CGCAAGGTGC TGGGCGAGCC GCTCGGCAAT CTGTTCTTTG CCGGTGAAGC GACCCACGAA ACGCTGTTCG GCACGGTGCA GGGCGCCTGG GAATCCGGCG AACGCGCCGC CGACGCCGCG CTGAAGAAGA TCGGCGCCGT CAAGGAGCCC GCGCCGGAGA AGCCCCTACG CAAACAGAAG CCGCGGCGCG AACCGCAGCG TCAGCGCGAG CAGCGCCCGC CCGCCACCGC GAGCGGCACG CCGTCGTGGT GGCGCTGA
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Protein sequence | MTISRRSLLE GLLGATAGLA LLPVLGGRAN AALPREAEVV VVGAGAAGIA AARRIVAAGR KVIVVEAASE IGGRCVTDTT SFAAPFDRGA RWLHNPDSNP LVRLARSSGF AVTPVAPGQK VRIGRRNARS RETEDFLAAF VRASRAISDA SRGKSDISCA AALPNDLGDW AATIEYVLGP ATTSKDLRAL SAMDAVRTLD RTALLGCPQG VGSLLTQLAS SLPIALSTPV KRIVWSGRDL AVETAAGRIG ARAIIVTAST NVLTSGNLGF SPELPKRQLD AAARLSLGSI DRIALQFKGN PLGLSRDETI IERADDIRTA TLVGNIGGTS LCTVDVAGSF GRQLAAQGEA AMQDFAIEWL GKLFGSDIAG AVERKAVTRW NEMPYVLGAM SAAEPGGQPS RKVLGEPLGN LFFAGEATHE TLFGTVQGAW ESGERAADAA LKKIGAVKEP APEKPLRKQK PRREPQRQRE QRPPATASGT PSWWR
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