Gene Rpal_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0035 
Symbol 
ID6407676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp38980 
End bp40437 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content71% 
IMG OID642709942 
Productamine oxidase 
Protein accessionYP_001989073 
Protein GI192288468 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1231] Monoamine oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATTT CGCGACGCAG CCTGCTCGAG GGGTTGCTCG GCGCCACTGC CGGGCTTGCG 
TTGCTGCCCG TGTTGGGCGG GCGGGCGAAC GCCGCTCTGC CGCGCGAGGC GGAGGTCGTG
GTGGTCGGCG CCGGCGCCGC CGGGATCGCG GCGGCGCGGC GGATCGTGGC GGCCGGCCGC
AAGGTAATCG TGGTCGAGGC CGCCTCGGAG ATCGGCGGCC GCTGCGTCAC CGATACCACC
AGTTTCGCAG CCCCTTTCGA CCGCGGCGCG CGCTGGCTGC ACAACCCCGA CAGCAACCCG
CTGGTCCGGC TGGCGCGCAG CTCCGGCTTT GCGGTGACAC CTGTCGCCCC CGGCCAGAAG
GTCAGGATCG GACGCCGCAA CGCCCGTTCG CGCGAGACCG AGGATTTTCT GGCGGCCTTC
GTCCGTGCCA GCCGCGCCAT CAGCGATGCG TCACGCGGCA AGTCCGATAT TTCCTGCGCG
GCCGCGCTGC CGAACGATCT CGGTGATTGG GCGGCGACGA TCGAATATGT GCTGGGCCCT
GCGACCACCA GCAAGGACCT GCGCGCGCTG TCGGCGATGG ACGCGGTGCG GACGCTGGAC
CGCACCGCGC TGCTCGGCTG CCCGCAGGGC GTCGGCAGTC TGCTGACTCA GCTCGCCTCT
TCGCTGCCGA TTGCACTGTC GACCCCGGTG AAGCGGATCG TGTGGAGCGG GCGCGATCTC
GCGGTCGAAA CCGCGGCCGG CCGGATCGGT GCGCGCGCCA TCATCGTCAC CGCGTCGACC
AATGTGCTGA CCTCGGGCAA TCTGGGGTTC TCCCCCGAAC TGCCGAAACG GCAGCTCGAC
GCCGCAGCAC GGCTGAGCCT CGGCAGCATC GACCGCATCG CGCTGCAGTT CAAAGGTAAC
CCGCTCGGGC TGTCGCGCGA CGAGACCATC ATCGAACGCG CCGACGACAT CCGCACCGCG
ACGCTGGTGG GCAATATCGG CGGTACCTCG CTGTGCACGG TCGACGTCGC CGGCTCGTTC
GGGCGCCAGC TCGCCGCGCA GGGCGAAGCC GCGATGCAGG ATTTCGCGAT CGAATGGCTG
GGCAAGCTGT TTGGCAGCGA CATCGCAGGC GCGGTCGAAC GCAAGGCGGT GACGCGCTGG
AACGAGATGC CTTACGTGCT GGGCGCGATG TCGGCGGCGG AGCCCGGCGG CCAGCCGTCG
CGCAAGGTGC TGGGCGAGCC GCTCGGCAAT CTGTTCTTTG CCGGTGAAGC GACCCACGAA
ACGCTGTTCG GCACGGTGCA GGGCGCCTGG GAATCCGGCG AACGCGCCGC CGACGCCGCG
CTGAAGAAGA TCGGCGCCGT CAAGGAGCCC GCGCCGGAGA AGCCCCTACG CAAACAGAAG
CCGCGGCGCG AACCGCAGCG TCAGCGCGAG CAGCGCCCGC CCGCCACCGC GAGCGGCACG
CCGTCGTGGT GGCGCTGA
 
Protein sequence
MTISRRSLLE GLLGATAGLA LLPVLGGRAN AALPREAEVV VVGAGAAGIA AARRIVAAGR 
KVIVVEAASE IGGRCVTDTT SFAAPFDRGA RWLHNPDSNP LVRLARSSGF AVTPVAPGQK
VRIGRRNARS RETEDFLAAF VRASRAISDA SRGKSDISCA AALPNDLGDW AATIEYVLGP
ATTSKDLRAL SAMDAVRTLD RTALLGCPQG VGSLLTQLAS SLPIALSTPV KRIVWSGRDL
AVETAAGRIG ARAIIVTAST NVLTSGNLGF SPELPKRQLD AAARLSLGSI DRIALQFKGN
PLGLSRDETI IERADDIRTA TLVGNIGGTS LCTVDVAGSF GRQLAAQGEA AMQDFAIEWL
GKLFGSDIAG AVERKAVTRW NEMPYVLGAM SAAEPGGQPS RKVLGEPLGN LFFAGEATHE
TLFGTVQGAW ESGERAADAA LKKIGAVKEP APEKPLRKQK PRREPQRQRE QRPPATASGT
PSWWR