| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0026 |
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| Symbol | |
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| ID | 6407667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 26926 |
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| End bp | 28659 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642709933 |
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| Product | gamma-glutamyltransferase |
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| Protein accession | YP_001989064 |
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| Protein GI | 192288459 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0405] Gamma-glutamyltransferase |
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| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase
[TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACAC TGCGCGTCCC GCAACGCATT TTGATGACGC TGGCCGCGCT GGTGCTGGTG
GTGATCCCGC TCGCCGCGCC GGCGCAGGAT ATGCGCAGCG GCATGGCGCG CGGGCCGACC
CAAGCGGTGG TCGCCAAACA CGGCATGGTA GTGGCGCAGG AACGGTTGGC TGCGAAAATC
GGCGCCGGCT TCCTGTCCCG CGGCGGCAAT GCGATCGATG CCGCGGTGGC GACCGGCTTC
GCCATGGCGG TCACCTATCC GCGTGCCGGC AATCTCGGCG GCGGCGGCTT CATGGTGATC
CATTCCGCGG TAAAGAATGA GGATGTGGCG ATCGACTATC GCGAAACCGC GCCGCAGGCC
GCCACTCAGG ACATGTTTCT GACCGACGGC AAACCCGACC CGGACAAATC GCGCAAATCC
GCGCTCGGCA TCGGTGTGCC CGGCACTGTG GCTGGATTGG CGCTGGCGCT CGAGAAATAC
GGCTCCGGCA AGTTCAAGCT AGCGGATGTG ATCGCGCCGG CGATCGCGCT CGCCCGCGAT
GGGATCACCG TCGCCGACGA CACCGCCGAC ACGCTACCGG ATTGGCACGC CTGGCTGTCG
CGCTGGCCTT CCACCCGCAA GGTGTTCGCT CGTCCCGACG GCTCGCCGCT GCAGGCCGGC
GACAGGCTGG TGCAGCCCGA TCTGGCGGCG ACGCTCGAAG CCATCGCCAA GCAGGGGCCG
GACGGTTTCT ACCGCGGCCC GATCGCCGAG AAGTTGTCAC GCGGCATTCG CGACGCCGGC
GGGTTGATCA CGCCCGAGGA TCTCGCCGGC TATCAGCCAA TGCTGCGATC GCCGCTACGC
GGTAACTATC GCGGCTACGA TATCGTGGCG ATGCCGCAGC CGTCGTCCGG CGGCGTCGTG
CTGATCGAAA GCCTGAACAT CCTCGAAGGC TATGCGATGC GCGACCTCGG GCAGGGCACG
CCGCCGTCGC TGCATCTGCT GATCGAAGCG ATGAAGCGCG CCTATGCGGA TCGCGCCCGC
TATCTCGGCG ATCCTGCCTT CAGCGAGGCG CCGATGACAA AGCTGCTGTC GAAGGACTAC
GCAGCGAGCC TGCGGGCCGG CATCGATCCG CAGCGCGCCA CTCCGGTCGC TGAGCCACTG
CCGCAGCCGC GCGAAGGCCA GAACACCACG CACTTCTCGG TCGCCGATGC CGAGGGCAAT
GCGGTCAGCA ACACCTACAC GCTCAACTTC TCTTACGGCG TCGGACTGGT AGCGGATGGC
ACCGGCGTGC TGCTCAACAA CGAACTCGAC GATTTCACAG CGGCTCCCGG TGCCTCCAAC
GCCTACGGCC TGGTCGGCTT CGCCGCCAAT CTGCCGGCGC CCGGCAAACG GCCGCTGTCA
TCGATGTCGC CGACGATTCT GCTGAAGGAC GGCAAACCGG TGCTCGTCAC CGGCTCGCCC
GGCGGCAGCC GCATCATTTC CGCAGTGCTG CAGGTGATCG TCGATGTGAT CGATTACCGG
ATGAACGTCG CGGACGCCGT GGCGGCGCCG CGGCTGCATC ATCAATGGCT GCCGGACGAG
GTGCGGGTCG AAGGCGGATT TCCCGAAGCG ACCTTGGACA CGCTCCGCGC GATGGGCCAC
CGCATCGTCA CCCCGCTCGG CCAGACCTCG GCGAATTCCA TCCTGATCGA CGCTGACGGC
TTCCATGGCG CCCCCGATCC CCGCACGCGG GGCGCGACGG CGGCGGGGAA TTGA
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| Protein sequence | MITLRVPQRI LMTLAALVLV VIPLAAPAQD MRSGMARGPT QAVVAKHGMV VAQERLAAKI
GAGFLSRGGN AIDAAVATGF AMAVTYPRAG NLGGGGFMVI HSAVKNEDVA IDYRETAPQA
ATQDMFLTDG KPDPDKSRKS ALGIGVPGTV AGLALALEKY GSGKFKLADV IAPAIALARD
GITVADDTAD TLPDWHAWLS RWPSTRKVFA RPDGSPLQAG DRLVQPDLAA TLEAIAKQGP
DGFYRGPIAE KLSRGIRDAG GLITPEDLAG YQPMLRSPLR GNYRGYDIVA MPQPSSGGVV
LIESLNILEG YAMRDLGQGT PPSLHLLIEA MKRAYADRAR YLGDPAFSEA PMTKLLSKDY
AASLRAGIDP QRATPVAEPL PQPREGQNTT HFSVADAEGN AVSNTYTLNF SYGVGLVADG
TGVLLNNELD DFTAAPGASN AYGLVGFAAN LPAPGKRPLS SMSPTILLKD GKPVLVTGSP
GGSRIISAVL QVIVDVIDYR MNVADAVAAP RLHHQWLPDE VRVEGGFPEA TLDTLRAMGH
RIVTPLGQTS ANSILIDADG FHGAPDPRTR GATAAGN
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