| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0022 |
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| Symbol | |
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| ID | 6407663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 23320 |
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| End bp | 24057 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642709929 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001989060 |
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| Protein GI | 192288455 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCAC GGAACGCAAC CGTCGCGGTG ATCGGAGCCG GCGATTACAT CGGGGCGGAG
ATCGCCAAGA AGTTCGCCGC CGAGGGCTTC ACTGTGTTCG CCGGCCGACG CAACGGGGAG
AAGCTGGCAC CGCTGGTGGC GGAGATCGAA GCCGCCGGCG GCCGCATCGT TGCTCGCTCG
CTCGATGCGC GTAACGAAGA AGAGGTGACG GCATTCCTGA ACGCTGCCGA CGCTCACGCG
CCGCTCGAAG TGACGATCTT CAACGTTGGC GCCAACGTCA ATTTCCCGAT CCTGGAGACC
ACCGATCGGG TGTTTCGCAA GGTCTGGGAG ATGGCGTGCT GGGCGGGCTT CGTGTCGGGG
CGAGAGTCGG CGCGGCTGAT GCTGGCGCGC GGGCAGGGCA AGATCTTCTT CACCGGCGCG
ACCGCGTCGT TGCGCGGCGG CTCGGGCTTT GCGGCGTTCG CCTCCGCCAA ATTCGGACTG
CGCGCGGTGG CGCAGTCGAT GGCGCGCGAA CTGATGCCGA AGAACATTCA CGTGGCACAT
CTGATTATCG ATTCCGGCGT CGACACCGCC TGGGTGCGCG AGCGCCGCGA ACAGATGTTC
GGCAAGGACG CGCTCGCCAA TCCCGACCTG CTGATGCCGC CGGCAGCGGT CGCCGGTGCT
TACTGGCAGC TCTATCAGCA GCCGAAGAGC GCCTGGACGT TCGAGATGGA AATCCGTCCC
TACGGCGAGA AGTGGTGA
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| Protein sequence | MTPRNATVAV IGAGDYIGAE IAKKFAAEGF TVFAGRRNGE KLAPLVAEIE AAGGRIVARS
LDARNEEEVT AFLNAADAHA PLEVTIFNVG ANVNFPILET TDRVFRKVWE MACWAGFVSG
RESARLMLAR GQGKIFFTGA TASLRGGSGF AAFASAKFGL RAVAQSMARE LMPKNIHVAH
LIIDSGVDTA WVRERREQMF GKDALANPDL LMPPAAVAGA YWQLYQQPKS AWTFEMEIRP
YGEKW
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