| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2537 |
|---|
| Symbol | |
|---|
| ID | 6376235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 2707575 |
|---|
| End bp | 2708042 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642685015 |
|---|
| Product | protein of unknown function DUF1232 |
|---|
| Protein accession | YP_001960912 |
|---|
| Protein GI | 189501442 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3339] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.36697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACAA AAGAGAAGGC ATACGAACGG GCCAGAAAAA AGGCAGAGAA GGTTGTCGGC
GATCCGGAAA AAGTCAAAAA AATAGTTAAC TCCGCTCTGA ACAAAGCCTC CTCAGCAGGC
TACTCATCAC AGTTTCAGGA AATCGCCGAT AAATTACAGG CGCTTGTGCG CCTTGTCAAA
AGCTGGCTCA ACAAGGAGTA CAGATCGACC CCATGGCAGA CGATCATCCT TGCTGTTACG
GCCCTTGTCT ACTTCGTCAC ACCCTTCGAC GCGATATTCG ACTTCATTCC CCTTCTCGGC
TTCGCCGATG ATGTAGCTAT ACTCACAGCC GTCCTCTCCT CGATCAACCA CGACCTCGAC
AAGTTCATCG AATGGGAGCA AAATCTCGTT CAGAACGACG AACCGTCGGC CTCCACGGTC
GACGCGGATT TCGAGGAAGT GGCAGGGGAA GGGGAGGCGG AAGACTGA
|
|---|
| Protein sequence | MTTKEKAYER ARKKAEKVVG DPEKVKKIVN SALNKASSAG YSSQFQEIAD KLQALVRLVK
SWLNKEYRST PWQTIILAVT ALVYFVTPFD AIFDFIPLLG FADDVAILTA VLSSINHDLD
KFIEWEQNLV QNDEPSASTV DADFEEVAGE GEAED
|
|---|
| |