| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2536 |
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| Symbol | |
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| ID | 6376234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 2706740 |
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| End bp | 2707561 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642685014 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_001960911 |
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| Protein GI | 189501441 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.237379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACT ATAATCAGCC CTTCAGCCCC GGAGGTTTTC AGGTCATGCC TCCGGCGATA
AAGACCATTA TACTCGCAAA TATCGCGGTA TTTCTTCTGC AGTTCTCTCC GTTAGGGATC
TATCTCATGT ACTTTGGTCC GTTGTGGCCT GTAGCATCTT CAGGGGAGTA CTCGTTTCAG
CTATGGCAGC TGATCACTTA CATGTTCATG CATGGTGGGT TTGCGCACAT CCTGTTCAAC
ATGTTCGCGC TCTGGCTTTT CGGCGCCGAA ATAGAAAACT ACTGGGGAAC GAAAGAGTTT
ACGACATACT ATTTCGTCTG CGGCATTGGA GCTGCTTTGC TGAATTTGCT GACAACCGCA
GGCAGTCAAT ATCCGACAGT CGGAGCTTCC GGAGCTGTAT TCGGCATACT GCTGGCGTTC
GGCATGATGT TTCCCGACCG GTATATTTAT CTCTACTTTC TCTTTCCTGT CAAGGCGAAA
TATTTCGTCG CGGGTTATGC CGGTATCGAA CTGCTGATGG GGATCAACAA CTCGACCATG
GGAAGCGGCA GCAACATCGC TCATTTCGCT CATCTCGGCG GGATGCTTGT CGGATTGGTC
TACATTAAGT CCCGCCAGCA GGGATGGTCA TTCTCCGAGT GGGTGGACAG GACCTTTCCC
AAAAAAGAAG AGAGCTCAGG GCCGAAACTG CACAAAAAAG AACCTGCTGC TCCGGTCTCC
GAAGAGGAGG TAGACGCCAT TCTCGACAAG ATATCCCGTC ACGGTTATGA ATCGCTGAGT
GATAAGGAAA AAGAGACCTT GCTGAAAGCA GGGGGCAAGT AA
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| Protein sequence | MNNYNQPFSP GGFQVMPPAI KTIILANIAV FLLQFSPLGI YLMYFGPLWP VASSGEYSFQ
LWQLITYMFM HGGFAHILFN MFALWLFGAE IENYWGTKEF TTYYFVCGIG AALLNLLTTA
GSQYPTVGAS GAVFGILLAF GMMFPDRYIY LYFLFPVKAK YFVAGYAGIE LLMGINNSTM
GSGSNIAHFA HLGGMLVGLV YIKSRQQGWS FSEWVDRTFP KKEESSGPKL HKKEPAAPVS
EEEVDAILDK ISRHGYESLS DKEKETLLKA GGK
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