Gene Cphamn1_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2521 
SymbolmurC 
ID6376219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2690006 
End bp2691403 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content55% 
IMG OID642684999 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_001960896 
Protein GI189501426 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.990535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCTGG GAAATACAAG ATGTGTGCAT ATTGTCGGTA TTGGCGGGGC GGGAATGAGC 
GCTATTGCCG AACTGTTGCT GAAATCGGGG TTTACTGTCA CCGGATCTGA TCTTGTCGCC
AGTGAGGTCA CGGGAAAACT TCAGGATCAG GGGGCAGCGG TCGCGCTGGG GCACAGTGCA
GAAAACATCG GAGCGTGTGA TGTGGTCGTT TACTCGTCCG CCGTAGCGGC AAGCGAGAAC
GAAGAGGTCG CGGCCGCCCT GCAGAAAGGC ATTCCTGTTA TCAAACGGGA TGAAATGCTC
GGGGAACTGA TGCGCTACAA GAGCGGTATC TGTGTCGCAG GCACTCACGG CAAGACGACG
ACGACCGCAA TGATCGCTAC AATGCTTATC GGCGCGGGTG AGTCTCCGAC CGTCATGATA
GGCGGTATAT CCGATGATCT GAAAGGGAGT ACCATGGTAG GGAGCGGAAA GTATATGGTG
ATTGAGGCGG ATGAATACGA TCGCGCGTTT TTGAAGCTGA CCCCTTCCCT GGCTGTTATC
AACAGCCTGG AGATGGAGCA CACCGATACC TATGCAGATA TCGAGGCGCT GAGAGATGCT
TTTGTTGCCT TTGCCAACAA GGTACCTTTC TACGGAAGAG TGTTCTGTTG TGTTGACTGG
CCGGAGGTAC GTAAAATCAT ACCCCGGATG AACAGGCGCT TGTTTACCTA TGGTATCGAG
GAGTCAGCGG ATCTTATGGC GCGCGATATA CAGATTGTCG GGCACGAGAC ACGGTTCACT
GTGGACTATC AGAAGCAGGA AATGGCGCGT GTCAGCATAG CTGCTCCCGG CAGACATAAT
GTGCATAACG CTCTGGCTGC CATTGCAACG GGACTTGAAA TGGGGCTGCC GGTTGACAGC
ATCGTTTCGG GGCTTGCCTC TTTCAGCGGG ATGAGACGGC GGTTTCAGAT TCTCTACGGC
AGAGCCGGAG GGCCGGTAAT CGTCGATGAT TACGCGCACC ATCCATCAGA GGTTAAAGCG
GCGGTAAAAG CTGCAAGGGC GGGTTGGCCG GAGCATGAGG TGATCGCTGT TTTTCAGCCG
CATCTTTTCT CCAGAACCAC GGCGTTTGCA GATGAGTATG GCTGGGCACT TTCCAATGCT
GACCGTGTCT GTGTTGCCGA CGTGTTTGCC GCACGGGAAA AAACCGCTGA CTATCCAGGG
GTCAGCGGCG AGCTTGTTGC GGAGGCGGCA CTGATGGCCG GGGCTCAACA GGTATCGTTT
ATCCCGGACA GAGAGGAACT CTGCACCACA CTTCAGGGTT ACTGTGTACC AGGGAATCTG
TTGTTATGTA TGGGGGCCGG GGACATCACA AAGATGGCAT CAGAACTTGC GGACCACTGT
AGAAAAAATG AGCCGTAG
 
Protein sequence
MELGNTRCVH IVGIGGAGMS AIAELLLKSG FTVTGSDLVA SEVTGKLQDQ GAAVALGHSA 
ENIGACDVVV YSSAVAASEN EEVAAALQKG IPVIKRDEML GELMRYKSGI CVAGTHGKTT
TTAMIATMLI GAGESPTVMI GGISDDLKGS TMVGSGKYMV IEADEYDRAF LKLTPSLAVI
NSLEMEHTDT YADIEALRDA FVAFANKVPF YGRVFCCVDW PEVRKIIPRM NRRLFTYGIE
ESADLMARDI QIVGHETRFT VDYQKQEMAR VSIAAPGRHN VHNALAAIAT GLEMGLPVDS
IVSGLASFSG MRRRFQILYG RAGGPVIVDD YAHHPSEVKA AVKAARAGWP EHEVIAVFQP
HLFSRTTAFA DEYGWALSNA DRVCVADVFA AREKTADYPG VSGELVAEAA LMAGAQQVSF
IPDREELCTT LQGYCVPGNL LLCMGAGDIT KMASELADHC RKNEP