Gene Cphamn1_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2443 
Symbol 
ID6376138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2605463 
End bp2606170 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content48% 
IMG OID642684921 
Productmembrane protein 
Protein accessionYP_001960819 
Protein GI189501349 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACTT TGATCGTTAT TCTGGCAGTG AGTTACCTTA TCGGCTCCAT ACCTACGAGC 
ATCATTGCGG GCAGGTTGCT TAAAGGGATT GATATTCGCG ATTTCGGTAG CGGAAACGCA
GGCGGTACCA ACGCGTTCAG GGTACTCGGC TGGAAAGCAG GCCTTACCGT CACCATTCTC
GATATCGTCA AGGGAGCCAT TGCGGCAATA TCCGTTGTGG TTTTCTTCGA GTCACACCCT
ATCGGGCCAT TGCCGGATAT CAATCCTATC GCGCTGAGGC TGATCGCGGG GTTAAGTGCG
GTTTTCGGCC ATGTCTTTAC GGTTTTTGCG GGCTTCAAAG GAGGCAAGGG CGTGAGCACT
GCAGCAGGCA TGATGTTCGG GATCGCTCCT GTGACAACCC TTATCGTTCT GGGTGTTTTT
CTTCTTGTCG TATTTCTTTC GAGATACGTT TCCGTTGCTT CCATTCTGGC GGCAATAGCA
TTTCCGGTCA TCATTGCCGT AAGAAAGTAT CTGTTTGATC TCGGTGAAGG CCTTGATTAC
TACATCAGGA TGTTCAATAC CAATGTGTTT ATTCATGACA GTCTCGATTA TCATTTGCTG
ATTTTCGGTT TTATCGTTGC TGCGGCAATC ATGTACACGC ACAGGGCAAA TATCCGACGC
CTTCTTTCAG GCAAAGAGAA CAGAGTCAAA TTTCACGGAC ATTCCTGA
 
Protein sequence
MFTLIVILAV SYLIGSIPTS IIAGRLLKGI DIRDFGSGNA GGTNAFRVLG WKAGLTVTIL 
DIVKGAIAAI SVVVFFESHP IGPLPDINPI ALRLIAGLSA VFGHVFTVFA GFKGGKGVST
AAGMMFGIAP VTTLIVLGVF LLVVFLSRYV SVASILAAIA FPVIIAVRKY LFDLGEGLDY
YIRMFNTNVF IHDSLDYHLL IFGFIVAAAI MYTHRANIRR LLSGKENRVK FHGHS