Gene Cphamn1_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2387 
Symbol 
ID6376082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2554278 
End bp2554844 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content53% 
IMG OID642684868 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_001960766 
Protein GI189501296 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACA AGAAAAATTA TGGAATGGTA ATCGATACAC GTGTGTGCGT TGGATGTTCC 
GCGTGTGTCT ATGCGTGCAA ATCTGAAAAC GGGGTGCCTG AAGGGTATTG CCGCGACTGG
GTTGTCCAGG AAACAAAAGG CCGTTTTCCG AAGCTCTCCA TGGAGAACCG TTCGGAGCGA
TGCCAGCACT GTGAAAATGC CCCGTGCGTC ACCTACTGTC CGACAAGAGC ATCACACTAT
GACGATAACG GAACGGTTCA GATCAACCGT TCGCGCTGCA CAGGTTGCAA GGCTTGTCTT
GCCGCCTGTC CTTACGACGC TCGCTATGTA CACCCTCAGG GATTCGCGGA CAAATGCTCA
CTCTGCAAGC ACAGGCTGGA CGAGGGTCTC GACACTGCCT GCGTCTCGGT CTGTCCGACA
AAAAGCCTGA ATCTGGTTGA CTTTAACGAT CCTGAAAACA AGGCGGAGCG CTTGATGAAC
GGCAAAGAGG TCTACAGGCA GAAAGACCAT GCCGGCACCA ATCCAAGCCT CTACTGGATT
TCAGCAAGGA ACAAACCCGG AGAATAA
 
Protein sequence
MADKKNYGMV IDTRVCVGCS ACVYACKSEN GVPEGYCRDW VVQETKGRFP KLSMENRSER 
CQHCENAPCV TYCPTRASHY DDNGTVQINR SRCTGCKACL AACPYDARYV HPQGFADKCS
LCKHRLDEGL DTACVSVCPT KSLNLVDFND PENKAERLMN GKEVYRQKDH AGTNPSLYWI
SARNKPGE