Gene Cphamn1_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2348 
Symbol 
ID6376043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2518094 
End bp2518450 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content46% 
IMG OID642684832 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_001960730 
Protein GI189501260 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAACA CAATATTCTC ACTTCTTTTA TTCTCACCGC AAAATCCGGG AGGAGCTGCG 
CCGAATCCGT TTATTCAGCT CGTACCGCTG CTTCTTATTT TTGTGGTATT CTACTTTTTC
CTCATCCGTC CGCAGCAGAA AAAACAGAAA GAACGCGAAA AGGTACTTGA AAGCCTGAAA
CGCGGTGACA AGATCATAAC CATCGGAGGT TTGCACGGAA CAGTAGCAGG ACTTGATGCA
GAGAAAAAAA CAGTACTGGT TCAGTTAGGC GACAACCTGA AAGTTACGTT TGACCGGAGC
GCCATAGCGT CCACGGAAAA ACAGGAATCG GGCGAGAAAC TCACAGCCAA GGATTAA
 
Protein sequence
MYNTIFSLLL FSPQNPGGAA PNPFIQLVPL LLIFVVFYFF LIRPQQKKQK EREKVLESLK 
RGDKIITIGG LHGTVAGLDA EKKTVLVQLG DNLKVTFDRS AIASTEKQES GEKLTAKD