| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2347 |
|---|
| Symbol | |
|---|
| ID | 6376042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 2517334 |
|---|
| End bp | 2517903 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642684831 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
|---|
| Protein accession | YP_001960729 |
|---|
| Protein GI | 189501259 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAA GACCGTTCCG GCTGTTTATC GCCTTTTTTG CGCTTGTGCT ATTACCCTGC
CCCGTCTGCG GCTTAGCAGC ATCGGCGCAC GAACCTGATC CTGAAAACAC CATCTATCTC
GACATTCCTT CCGGCAGAAT CGTCATTCAG CTCCGTCCTG AAATAGCCCC GTCCCATGTG
AACCGCATCA AGGAGCTTAC CCGACAGGGT TTTTATGACG GCCTGGCTTT CCACAGGGTA
CTCCCGGGCT TCATGGCACA GACCGGCGAT CCGCTCGGCG ACGGCACAGG AGGATCGGGT
AAACAGATCA AGGCGGAATT CTCCAACGAA AAGCACCTCC GCGGGACCGT CTCCATGGCA
AGGGCCGAAG ATCCCGACAG CGGAGACAGC CAGTTTTTCA TCTGCTTCGC GCCTGCGCCA
TTCCTCGACG GCAACTATTC GGTCTGGGGC AAGGTCATCT CCGGCATGGA GTTCGTCGAC
ACTATCAAAA CCGGCTCGCG ATACAACAAC GGCGTCGTTT CAAACCCGAC CAGAATCATC
CGTATGCGGG TCGCAGCGGA CTTCCCCTAA
|
|---|
| Protein sequence | MLKRPFRLFI AFFALVLLPC PVCGLAASAH EPDPENTIYL DIPSGRIVIQ LRPEIAPSHV
NRIKELTRQG FYDGLAFHRV LPGFMAQTGD PLGDGTGGSG KQIKAEFSNE KHLRGTVSMA
RAEDPDSGDS QFFICFAPAP FLDGNYSVWG KVISGMEFVD TIKTGSRYNN GVVSNPTRII
RMRVAADFP
|
|---|
| |