Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2312 |
Symbol | gatB |
ID | 6376007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2483148 |
End bp | 2484575 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642684799 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_001960697 |
Protein GI | 189501227 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00554328 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.218132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTATG AATTAGTGGT GGGCCTTGAA GTCCACTGTC AGTTGAACAC GAACAGCAAA GCGTTCTGCG GTTGTTCGAC AGAGTTCGGT AAACCTGCCA ACACCAATGT ATGCCCGGTG TGTCTCGCGC TTCCCGGTGC TTTGCCGGTA CTTAACCGTC GTGTTGTCGA AGATGCGGTC AAGCTTGGAC TGGCTACGGA TTGTACTGTC GCCAGGCAGT CGATCCTTGC CCGGAAAAAC TATTTTTATC CTGATCTGCC GAAAGGTTAC CAGATATCCC AGTTCGAAGA GCCCATCTGT TCCGAAGGGA TGGTTTTTGT CGATACGGAT GAGGGGCGGA AAAATATACG ACTGGTCAGA ATTCACATAG AGGAGGATGC AGGTAAATCA ATACACGATA TCGGTGACGA TACCTTCATC GATGTCAACC GGTGCGGTGT TCCGCTGCTT GAAATTGTGA GTTATCCCGA TATCCGTTCC GCCGGTGAGG CGTCGTCGTA TTTGCAGAAG CTTCGCCAGA TCATCAAGTA TCTCGGTATA TCGGACGGCA ATATGGAAGA GGGCAGTCTT CGCTGTGATG CCAATGTTTC TGTCCGGCTG ACAGGTGCTG AGGAGTACGG TACGAGGACA GAGATAAAGA ATATGAACTC CTTCAAGAAT GTTGAAAAGG CGATCGAGTA TGAGGCGAAG CGCCATATCG ACGTTCTGGA GAACGGTGGA ACGATTTTTC AGGAGACCCG CCTGTGGGAT GCCGACAGGC AGGAGACCCG ATCGATGCGC GGTAAGGAGT TTGCTCATGA CTATCGATAT TTTCCTGATC CGGATCTGGT GCCGATTGAG GTTGATGAGG AGATGCTCGA TCGTCTCAAA CAGGAACTCC CCGAGCTTCC CGAGGTGCGC GCAGAACGAT TTGTCAGGGA AACAGGTATT CCCGCATATG ACGCCGGCGT ACTGACAAGC GAACGTGAAG TCGCAGACTA TTTCGAAAAG GTTGTCCGCG CTTGCGGTGA CGCAAAGGCG GCATCCAACT GGGTGATGGG TGAGGTGCTG CGGACACTCA AGGAGAAGAA TATTCCTGTC GCCCTGTTTT CCGTATCGCC TGAACGTCTG GGAGGCCTTC TCAATCTCAT AGGAAAAGGA ACGATAAGTA CTACCATCGC CAAACAGGTG TTTGAACGTA TGCTTGAAAC CGGTGATGAT GCAGCGGCCA TAGTTGAAAA GGAAGGACTT GCCCAGATAT CGGACACTAC CGAGATAGAA ACGCTTGTTC AGGATATTAT CGAAGCCAAT CCGGGACAGG TGGAGCAGTA CAGGAGCGGA AAAACCAGGA TTTTCGGTTT CTTTGTCGGC CAGTGTATGA AAGCGATGAA AGGCAAGGCG AATCCTGTTG TTGTGAATGA AATTTTGAAA CAGAAGCTTG ACGGGTAA
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Protein sequence | MSYELVVGLE VHCQLNTNSK AFCGCSTEFG KPANTNVCPV CLALPGALPV LNRRVVEDAV KLGLATDCTV ARQSILARKN YFYPDLPKGY QISQFEEPIC SEGMVFVDTD EGRKNIRLVR IHIEEDAGKS IHDIGDDTFI DVNRCGVPLL EIVSYPDIRS AGEASSYLQK LRQIIKYLGI SDGNMEEGSL RCDANVSVRL TGAEEYGTRT EIKNMNSFKN VEKAIEYEAK RHIDVLENGG TIFQETRLWD ADRQETRSMR GKEFAHDYRY FPDPDLVPIE VDEEMLDRLK QELPELPEVR AERFVRETGI PAYDAGVLTS EREVADYFEK VVRACGDAKA ASNWVMGEVL RTLKEKNIPV ALFSVSPERL GGLLNLIGKG TISTTIAKQV FERMLETGDD AAAIVEKEGL AQISDTTEIE TLVQDIIEAN PGQVEQYRSG KTRIFGFFVG QCMKAMKGKA NPVVVNEILK QKLDG
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