| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2279 |
|---|
| Symbol | rpsE |
|---|
| ID | 6375973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2458247 |
|---|
| End bp | 2458765 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642684765 |
|---|
| Product | 30S ribosomal protein S5 |
|---|
| Protein accession | YP_001960664 |
|---|
| Protein GI | 189501194 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0098] Ribosomal protein S5 |
|---|
| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000167346 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00339787 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGA GAACAGCGAA CAATATCAAG CCTGGTGAGT TAAATCTGAA AGAGAAGCTG
GTTCATATCA ACAGAACGGC TAAAGTTGTC AAAGGTGGAA AAAGATTCGG TTTCAATGCT
ATCGTTGTTG TAGGTGACAA GGAAGGTCAT GTCGGCTTCG GGCTCGGGAA GGCCAATGAG
GTTCAGGATG CGATCGCTAA AGGTGTTGAA GATGGCAAGA AGAACGTGAT CAAGGTTCCG
ATTGTAAAGG GTACTATTCC GCATCAGATT ATTGCCAGAT ATGGATCTGC TAAAGTTATG
ATGAAGCCTG CAACACCGGG AACAGGGTTG ATCGCTGGCG GTGCGGTTCG TGCCGTACTT
GAAATGGCAG GTATACATGA TATTCTTGCT AAATCGCTTG GTTCGTCCAA TCCTCACAAC
GTGGTGAAAG CCGCGATTAG TGGCCTGGAA AGTATATCGG ATGCCTACGA CGTAGCGGAG
CGACGTTCAA AAAGTCTGAA AGAGGTTTTT GAAAGCTAA
|
|---|
| Protein sequence | MAKRTANNIK PGELNLKEKL VHINRTAKVV KGGKRFGFNA IVVVGDKEGH VGFGLGKANE
VQDAIAKGVE DGKKNVIKVP IVKGTIPHQI IARYGSAKVM MKPATPGTGL IAGGAVRAVL
EMAGIHDILA KSLGSSNPHN VVKAAISGLE SISDAYDVAE RRSKSLKEVF ES
|
|---|
| |