| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2276 |
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| Symbol | secY |
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| ID | 6375970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2456117 |
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| End bp | 2457442 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642684762 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001960661 |
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| Protein GI | 189501191 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000725785 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00410487 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCTGA CTGAGAGCCT GCAGAATATA AATAAGATAC CAGAATTGCG GCAGCGGATT
TTGTATACGC TGCTGCTCTT GTTTATTTAC AGAATAGGGT CGCATATTAC CCTCCCCGGA
GTGGACGCTG CCGCAGTATC CGGAGCGTCA CAGACTCATG CAAATGACCT GTTCGGCCTC
TTCGACCTTT TCGTCGGAGG CGCGTTTGCA CGAGCATCCA TTTTCTCTCT CGGGATTATG
CCGTATATTT CAGCCTCCAT CATTATCCAG CTGCTGGGCG CGGTTACTCC CTATTTTCAG
AAATTACAGA AAGAGGGTGA GGACGGGAGA CAGAAAATCA ATCAGTATAC CCGATATGGC
ACTGTATTGA TCGCATCACT ACAGGCCTGG GGTGTAAGTG TGAGTCTTGC AAGTCCGGCA
TCATTCGGAC GAATTGTCGT GCCTGATCCC GGGTTGTTTT TTCAGTTTTC TGCCGTGGTG
ATTCTCACAG CCAGCACGCT TTTTATCATG TGGCTTGGCG AGAAAATTAC CGAGAGCGGT
ATAGGAAACG GCATATCGCT GATAATCATG ATCGGTATTC TTGCACGCTT TCCACAGTCT
CTTATCGCGG AGTTTCAGTC TGTATCGCTT GGAAGTAAAA ACTGGATCAT CGAGGTTATC
ATTCTTGGCT TGATGGTTGC TATTGTCGCG GCTGTTGTGG TGCTCACTGT AGGTACGAGG
CGAATACCCG TACAGCATGC CAAAAGAGTG GTCGGGAGGA AAATGTATGG TGGCGGTACC
CAGTATATTC CGATGAGGGT GAACACGGCG GGTGTTATGC CTATTATTTT CGCACAGTCT
ATCATGTTTC TGCCAAGTAC CTTCGTTTCG TTTTTTCCTG AAAGCGAGAT TATGCAGGGT
GTCGCGAGGG TGTTCGCCTA CGACTCCTGG TGGTATGCCG TTATGTTCGG TTCCATGATT
GTCTTTTTCA CCTATTTTTA TACGGCTATC GCGTTCAATC CGAAAGAGGT TGCCGATACG
ATGCGTAAAC AGGGCGGATT TATTCCCGGA GTCAGACCGG GCAAAAGCAC GGCTGATTTT
ATTGATAATA TTTTAACCCG AATCACGCTT CCCGGGGCTA TTTCACTGGC GTTTATAGCG
GTTCTGCCGA CGTTTCTGAC CAAGTTCGCT AACGTGACTC CTGGATTCGC GCAGTTTTTC
GGCGGTACAA GCCTGTTGAT TATCGTCGGG GTTGGACTTG ATACGCTGCA GCAGATAGAG
AGTCATTTGC TTATGCGCCA TTATGACGGG TTCATGAAGT CCGGCAAGGT CCGCGGTCGC
CGGTAG
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| Protein sequence | MKLTESLQNI NKIPELRQRI LYTLLLLFIY RIGSHITLPG VDAAAVSGAS QTHANDLFGL
FDLFVGGAFA RASIFSLGIM PYISASIIIQ LLGAVTPYFQ KLQKEGEDGR QKINQYTRYG
TVLIASLQAW GVSVSLASPA SFGRIVVPDP GLFFQFSAVV ILTASTLFIM WLGEKITESG
IGNGISLIIM IGILARFPQS LIAEFQSVSL GSKNWIIEVI ILGLMVAIVA AVVVLTVGTR
RIPVQHAKRV VGRKMYGGGT QYIPMRVNTA GVMPIIFAQS IMFLPSTFVS FFPESEIMQG
VARVFAYDSW WYAVMFGSMI VFFTYFYTAI AFNPKEVADT MRKQGGFIPG VRPGKSTADF
IDNILTRITL PGAISLAFIA VLPTFLTKFA NVTPGFAQFF GGTSLLIIVG VGLDTLQQIE
SHLLMRHYDG FMKSGKVRGR R
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