| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2247 |
|---|
| Symbol | |
|---|
| ID | 6375941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 2434562 |
|---|
| End bp | 2436274 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642684734 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001960633 |
|---|
| Protein GI | 189501163 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGT TACCTCTCTG TATAGCGCTG TGCCTGCTCC TTGCTGCTTG CGCGCTTGAC
CGTCCGCCGA CGGGAGGCCC GACGGACACC GAACCCCTTC AGGTTCTTTC CGTTGACCCG
CCCGCATCAT CCGTCAACAG TTCTCCTGAA ACTGTTCATT TCAGCTTCAA CCGGTATGTA
TCCACGTCAT CCCTGAAAAA CTCACTGGTA TTTTCTCCTG CAATCCCCGA CTACAGCCTG
AAAGCGGACG GCAAAGAAGC TGAAATCCGG TTCAACACCT CTCTTGGAGA AAACAAAACC
TATACGATCA CCCTCAACAA ATCCCTGAGA AGCAGCAGGG GAAACGAGCT CCGGCAAAGC
TACTCCTATG CGTTTTCAAC CGGTCCGGAA ATAAACCGGG GAATCATTGC CGGTCAGGTC
TTTTCCCATG ATACCCGTCC TCAACCGGGA GCGACTGTTC TCGCCTACGT GGTATCAGAA
AACGATACGC TCCCGAATGA TATTTTGAAC CGCGTTGCGG ATTACAGCAT ACAAACAGGG
CGTAACGGAG CATTCACGCT CGACTATCTT GCTGAAGGCA ACTACCGGCT GATCGCTCTG
CTGGATAAAA ACAGCGACAA GAGGCTCGAC CCCGAAAACG AACCGTTCGG GGCAGGAAAC
CGGAAACTGG TTCGAACAGG AAGCGCTGAC AACCTGTTCA GGCTTTCTCA GCCGGAAAGT
CCTCCCAAAC TGATCTACTG CACTTCACCT GCGGATAACC TTTTCGAAAT CAGCTTTAAC
CGACCGTTAT CCGTTGACAC GTTCACCCTC AACGCATTGA GCGTTACCGA TACAGTGCGA
AATGTCACGC TCCCTGTACA AGGATTCTAC AGCGTGAAAA ATACCGGAGA ATCCATGACA
TTCCGTGTTG TCACCGGGCC TCTCGACAGA AAATCGGTAT ACCGGGTAAC CTATTTGACC
GACAACGAAG AACCCGCTTC TTCAGCTTTG TGCAGTGGTA GCGACAAACC GGCAAAGGAC
GCCCTGGCTG TAGAGAAACT GCTGCCGAAA AACGGTGAAA CCGCCGCGTT TCTTGTTCAA
TCCCGTCCCG ATCGGAGAAG AACGATCGAT ATTGCGTTCA ACCAGCCGGT TGCCATGCAG
TCGCTCGAAC AGTCGATCAA ACTCTACGCC ATGAACGGCG AAACACCGTC GCTTCATGCG
TTCACGCTCG AACCTGTAGA TGACCGGCGA TACAGCGTGC AGGCCGATCC GGATTTCCGT
AATGGAGCCT CCTATCGTCT CGATATCGAG CAGAAGAGCA TCACTCCGCT CACAGGTCTA
CAGGCTGCGG ATTCGCTTGT GACAACACTG TTTACGGTTG CCAATGCAGG AGATTTCGGA
TCCATCTCCG GAACCGTGAC AGGAGGAACC GGAACCTTTG TAGTCGAGGC GCTTGAAACA
GCTGGCAGAC TTCCCCGCAA AACGGTTATC AGGCGTGAGG ACGGCAGACG CGCCTCATTT
ACCATAGACG CGCTCGCTCC GGGCAAATAC ACGCTCAGGG CATTTATCCC TCGCTCTGGA
ATACAGACTG ACAACAACAT TTCCTGGAAC CCCGGCAGCG TCTCCCCTTT CAGGCCGGCT
GACCGGTTTA CCGTGAATCC AGATACGGTA ACCGTCCGAA AAGGCTGGGC CACAGAAAAT
ATACCGCTTG TCTTCCCTCC CGCCTCCGAG TGA
|
|---|
| Protein sequence | MKPLPLCIAL CLLLAACALD RPPTGGPTDT EPLQVLSVDP PASSVNSSPE TVHFSFNRYV
STSSLKNSLV FSPAIPDYSL KADGKEAEIR FNTSLGENKT YTITLNKSLR SSRGNELRQS
YSYAFSTGPE INRGIIAGQV FSHDTRPQPG ATVLAYVVSE NDTLPNDILN RVADYSIQTG
RNGAFTLDYL AEGNYRLIAL LDKNSDKRLD PENEPFGAGN RKLVRTGSAD NLFRLSQPES
PPKLIYCTSP ADNLFEISFN RPLSVDTFTL NALSVTDTVR NVTLPVQGFY SVKNTGESMT
FRVVTGPLDR KSVYRVTYLT DNEEPASSAL CSGSDKPAKD ALAVEKLLPK NGETAAFLVQ
SRPDRRRTID IAFNQPVAMQ SLEQSIKLYA MNGETPSLHA FTLEPVDDRR YSVQADPDFR
NGASYRLDIE QKSITPLTGL QAADSLVTTL FTVANAGDFG SISGTVTGGT GTFVVEALET
AGRLPRKTVI RREDGRRASF TIDALAPGKY TLRAFIPRSG IQTDNNISWN PGSVSPFRPA
DRFTVNPDTV TVRKGWATEN IPLVFPPASE
|
|---|
| |