| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2245 |
|---|
| Symbol | |
|---|
| ID | 6375939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2432225 |
|---|
| End bp | 2432812 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642684732 |
|---|
| Product | hydrolase, HAD-superfamily, subfamily IIIA |
|---|
| Protein accession | YP_001960631 |
|---|
| Protein GI | 189501161 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0241] Histidinol phosphatase and related phosphatases |
|---|
| TIGRFAM ID | [TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGAA AGGTAAAGGT ACTCTTTCTC GACAGGGATG GAACGATCAA TCGTGATATA
GGTACGTATG TCACTAACAG AGAGCAGTTC AAGCTGATCG ATGGAGCGGG TGAAGCAATC
GCGATTGCAA GAAAGGCAGG TTTTGAAATA GTTATCATCA CCAACCAGGC AGGTATTGCA
AGAGGTGTTG TCACTCCCGG GCAGGTTGAA GATATTCATG ACTATCTGAA TGAGTTGCTT
GCAGCCAGTG ATACATCTTA TGACCGGATA TACTACTGTC CTTCCCATCC TGATTACCCG
CATTCTGAAT ATGATCGTTT TGCATTGTGC AGAAAGCCTG AAACCGGAAT GGTTGACCGG
GCAGTTGCCG ATTACCTTTC TTCGGGCATA GACGTTGACA AAGCGCACTC TTTTTTTATC
GGTGACAAGA CGGTTGATGT CGAGTGCGGA AGACGTGCAG GCCTCCGGTC TGTTCTTGTC
AGAACCGGAC ACGGAGAAGA AGATCTTTGC CGAAAACGCC GGATTGTTCC TGATTTTATT
GCGGATGATC TCTACCAGGC GATCACGGAG TATGTCATCA AGCAGTGA
|
|---|
| Protein sequence | MMRKVKVLFL DRDGTINRDI GTYVTNREQF KLIDGAGEAI AIARKAGFEI VIITNQAGIA
RGVVTPGQVE DIHDYLNELL AASDTSYDRI YYCPSHPDYP HSEYDRFALC RKPETGMVDR
AVADYLSSGI DVDKAHSFFI GDKTVDVECG RRAGLRSVLV RTGHGEEDLC RKRRIVPDFI
ADDLYQAITE YVIKQ
|
|---|
| |