Gene Cphamn1_2237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2237 
Symbol 
ID6375931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2422669 
End bp2423592 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content49% 
IMG OID642684724 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_001960623 
Protein GI189501153 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.674489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCTC TCCGCGTTTT CGCGCTTCTA TCCCTTCTGA TACTTGCCTT TCAGCCCGGT 
TCATACGCCG GATCGGCTAC TCAGCCTGAC ACGCTTGATT TTGAACAGGA AATCAATTCC
TACATTCTCA AGGATATCGG CACATCCGAG ATTCTCATGT CAAAGAATAC CGGAAAGCGT
ATTCAGCCGG CAAGCCTGAC AAAAATTCTT ACCTCGATTA TGGCGATTGA AAGCGGTAAA
CTCGGAGATT ATGTGGTGAT CCCGAAAGAG GCGACAGTTG TAGAACCGAC AAAGGCCGGT
TTTCAGGCAG GAGAGAGGAT ACGTCTTGTT GATCTTGTCA AGGCGTCTAT GGTACGGTCA
AGCAATGATG CCGCTTTTGC CATTTCGATC TATCTGGGCG GAAGTGTACA GGGTTTTGCC
CGGATGATGA ACCGCAAGGC AAGGAAGATA GGTATGAGAA ATTCAAACTT TACCAATCCG
GCGGGGTTTG ACAGGGATCT CTATGCAGGG CACTACTCGA CTGCGCGGGA TCTGCTGCGG
CTTTCCGAGT ATGCGATAGG CAACGAGATA TTCAACCGTA TAGCCGCACT GGATTCAATA
TCTTTTTTCG AACAGAATAC CAGGAAAAAG TACACCCTCA AGTCGAGCAA CAAACTCCTC
GGGAAGTATC AGTACGCTGT CGGTATTAAG ACCGGATATA CCATGAAGGC GGGCAGGTGC
CTTATTGCCA GGGCGAAAAA GGGCGAGAAG GATATGGTTC TTGTCATGCT CAAGGCAGGG
CGCAAACGTT GGGCGCTTGC TGAGCAGATG TTTGAAAAAG GATTTTCAAT GCGACAACGG
GACAGGATTT CAGACTATCC GGTGACCCAG CAGGAGGCGG CCAAACCGCT CATGTTATTG
GGAAATGAAC TGCAGGGGAA ATAG
 
Protein sequence
MRSLRVFALL SLLILAFQPG SYAGSATQPD TLDFEQEINS YILKDIGTSE ILMSKNTGKR 
IQPASLTKIL TSIMAIESGK LGDYVVIPKE ATVVEPTKAG FQAGERIRLV DLVKASMVRS
SNDAAFAISI YLGGSVQGFA RMMNRKARKI GMRNSNFTNP AGFDRDLYAG HYSTARDLLR
LSEYAIGNEI FNRIAALDSI SFFEQNTRKK YTLKSSNKLL GKYQYAVGIK TGYTMKAGRC
LIARAKKGEK DMVLVMLKAG RKRWALAEQM FEKGFSMRQR DRISDYPVTQ QEAAKPLMLL
GNELQGK