| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2227 |
|---|
| Symbol | |
|---|
| ID | 6375921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2412584 |
|---|
| End bp | 2413591 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642684714 |
|---|
| Product | bacteriochlorophyll c synthase |
|---|
| Protein accession | YP_001960613 |
|---|
| Protein GI | 189501143 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01476] bacteriochlorophyll/chlorophyll synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTTA CCGCCAACCG CAGGTTGAGT TTTGTCGATA AGGTTCGAGC TCATATCGAG
ATTCTGGACC CGGTGACCTG GATCAGTGTT TTTCCATATC TGGCAGGAGG TGTTATGGTT
TCCGGGGCCA TGCTTCCGAC TCTTCATGAT TACCTGCTTC TTTTTGCGGT TTTTTTGATG
TTCGGTCCAC TGGGGACAGG TTTCAGTCAG TCCATCAATG ATTATTATGA TCTTGAACTG
GACAGTGTCA ACGAGCCGAC ACGGCCAATT CCATCAGGGA GATTGACGAA AAAAGAGGCT
TTATGGAACA GCATGGTGGT GTTTTTTCTT GCTTTCGGAT TGGGGGTCTT TCTGTGCTTT
TACATCGGAG GAGCAAGAGG GCTGATTATC TTTTCTTCTA TAACGGCAGG CTTGATCGTT
GGTTATATAT ACTCCGCGCC GCCGCTGAAA CTCAAGAAAA ACATCTTGAC ATCCGCACCT
GTTGTAGGGT TTTATTACGG GTTCATAACC TGGTTTTCGG CAAATGCTCT GTTCAGCGAG
ATTCGACCGG AAGTATACTG GTTGGCAGGA CTTAACTTTT TTATGGCAAT GGCATTAATC
ATTCTCAATG ATTTCAAATC CACGAAAGGT GATAAAGAGG GCGGCTTGAA ATCACTTACG
GTCATGATTG GTTCCAAAGG CACTTTTCTG GTTTCATTTA TTATTATTGA TCTGGTATTT
CTTGTTTTCG CATGGCTTGA GTATACCTGG GAATTATATC CACTCGTCTT TTTAATGCTG
GGTGGTCTTG TGCTGAACAT CATTCTGCAG ATAAAGCTGT ACAGGAATCC CGAGGGGGGG
ATTTCCATTG CCAATACCGT TGTCAAGGAA GGTTTTGGCA ATACGATCGG AAAGAGTGAC
GTTGTCGAGC ATAATGCTTT TTTACGGTTT CAGGTGGCAA ACAATATTAT ATTTTTGTTT
AACAATCTCA TTGCGGCCGG TGCTATCGGC ATGAAATATA TGCTCTGA
|
|---|
| Protein sequence | MSFTANRRLS FVDKVRAHIE ILDPVTWISV FPYLAGGVMV SGAMLPTLHD YLLLFAVFLM
FGPLGTGFSQ SINDYYDLEL DSVNEPTRPI PSGRLTKKEA LWNSMVVFFL AFGLGVFLCF
YIGGARGLII FSSITAGLIV GYIYSAPPLK LKKNILTSAP VVGFYYGFIT WFSANALFSE
IRPEVYWLAG LNFFMAMALI ILNDFKSTKG DKEGGLKSLT VMIGSKGTFL VSFIIIDLVF
LVFAWLEYTW ELYPLVFLML GGLVLNIILQ IKLYRNPEGG ISIANTVVKE GFGNTIGKSD
VVEHNAFLRF QVANNIIFLF NNLIAAGAIG MKYML
|
|---|
| |