Gene Cphamn1_2174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2174 
Symbol 
ID6375868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2352919 
End bp2353704 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content51% 
IMG OID642684661 
Productalpha/beta hydrolase fold 
Protein accessionYP_001960560 
Protein GI189501090 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAGCT ATACAAGCGT CCATCTGCAG ACAACAGCAC CTCCGGAGCA TGCGGTGCTG 
CTGCTTCACG CCTTTCCGCT TTCCGCGGAG ATGTGGAAAC CTCAACTTTC GATGTTCGAA
AAAGAGGGCA TTCCTGCAAT CGCGCCGAAT GTTTTCGGTG TGAATGGATC AAAAACAATG
CCGAACTGGA CGTTCAGCGA CTACATACAG GAGCTTGCCT CTCTGCTCTC TTCACTTCAT
ATCGACAAAG TAACGGTAGT CGGCCTTTCC ATGGGGGGCT ATCAGGCATT TGAACTCTGG
CGGACGCTTC CTGAAAAGAT CTCTTCCATG GTTCTTTGCG ATACCAAAGC GGAGCAGGAC
AACGAGGCTG CACTTGCCGG TCGCAGGGAC TTCATCTCCG CTGTCAGGGC TCGCGGTGCT
CAGGAAGCTG TAGACAGGAT GCTGCCCAAC ATTATGGCAA CGGAAACCTA TACCTCCAAA
CCTGAACTCA TCGAGACGTT TAAAGAGATC GTCAACAAAC AGTCTGGTGA TGTCATCGCA
GACGCCATGC AGGCAATTGC GTCCAGGAGC GATTCGATTG ATACGCTTGC TACCATCAAC
CGTCCCGTCA CCTTTATTAC AGGAATGGAA GACAAGCTCA CCCCGGCTCA TCTCGCAAAG
TCAATGCACC AGCATGTTTC AGGTTCCACG CTTCACCTTG TTACGGGTGC AGGCCATCTT
TCCAACATGG AACAGCCGGA GGTTTTTAAT CGCCATCTGC ATGATCATCT GAAAAAGAGT
TTCTGA
 
Protein sequence
MLSYTSVHLQ TTAPPEHAVL LLHAFPLSAE MWKPQLSMFE KEGIPAIAPN VFGVNGSKTM 
PNWTFSDYIQ ELASLLSSLH IDKVTVVGLS MGGYQAFELW RTLPEKISSM VLCDTKAEQD
NEAALAGRRD FISAVRARGA QEAVDRMLPN IMATETYTSK PELIETFKEI VNKQSGDVIA
DAMQAIASRS DSIDTLATIN RPVTFITGME DKLTPAHLAK SMHQHVSGST LHLVTGAGHL
SNMEQPEVFN RHLHDHLKKS F