Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2170 |
Symbol | |
ID | 6375864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 2348614 |
End bp | 2349348 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642684657 |
Product | ABC transporter-related protein |
Protein accession | YP_001960556 |
Protein GI | 189501086 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.529851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTATCGA CACTGAGCTG CAGCAATCTG AAAAAGATTT ACAACAAACG TGAAGTTGTC AGAAGTTCGA CCCTGGAGGT CAGACAGGGG GAGATTGTGG GGCTTCTCGG CCCGAACGGA GCCGGGAAGA CGACAACGTT CTATATGATT GTCGGTCTGA TTCGTCCGAA CGTTGGGGAT GTGTTTCTCG ATGAGCGGAA TATCACCGCG TTACCCATGT ATAAACGGGC GCGACTGGGG ATCGGCTATC TTCCCCAGGA ATCGTCGGTG TTCAGAAAAC TTACCGTGGA AGAGAACATT CTCAGTGTTC TTGAATTCAC TTCCCTCTCA AAAGCCGAAC AGCGGGAAAG AACCGAGGAG ATGCTCGAGG ACCTGAACAT CGCCGGCATC CGGAAAAGCA TGGGCTATGC CCTCTCGGGA GGTGAACGAC GCCGGACGGA AATAGCCCGC GCGCTTGCCA TCCGGCCGAA ATTCATTCTG CTTGACGAAC CATTCGCCGG AGTCGATCCG ATCGCCGTGG AGGATATACA GGAGATAGTC GAAGGCCTTG TCAAGCGAAA CATCGGGGTA CTCATCACGG ACCACAACGT CCATGAAACC CTCTCCATCA CCAACCACGC GTATCTCCTG TTCGACGGCA CAATTTTCAT GCAGGGAACC CCGGAAGAGA TCGCCGATAA TCCGGAAGCC CGAAAACTCT ACCTGGGCGA AAAATTCACC CTTGATCGCT ACTGA
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Protein sequence | MVSTLSCSNL KKIYNKREVV RSSTLEVRQG EIVGLLGPNG AGKTTTFYMI VGLIRPNVGD VFLDERNITA LPMYKRARLG IGYLPQESSV FRKLTVEENI LSVLEFTSLS KAEQRERTEE MLEDLNIAGI RKSMGYALSG GERRRTEIAR ALAIRPKFIL LDEPFAGVDP IAVEDIQEIV EGLVKRNIGV LITDHNVHET LSITNHAYLL FDGTIFMQGT PEEIADNPEA RKLYLGEKFT LDRY
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