Gene Cphamn1_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2170 
Symbol 
ID6375864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2348614 
End bp2349348 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID642684657 
ProductABC transporter-related protein 
Protein accessionYP_001960556 
Protein GI189501086 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.529851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATCGA CACTGAGCTG CAGCAATCTG AAAAAGATTT ACAACAAACG TGAAGTTGTC 
AGAAGTTCGA CCCTGGAGGT CAGACAGGGG GAGATTGTGG GGCTTCTCGG CCCGAACGGA
GCCGGGAAGA CGACAACGTT CTATATGATT GTCGGTCTGA TTCGTCCGAA CGTTGGGGAT
GTGTTTCTCG ATGAGCGGAA TATCACCGCG TTACCCATGT ATAAACGGGC GCGACTGGGG
ATCGGCTATC TTCCCCAGGA ATCGTCGGTG TTCAGAAAAC TTACCGTGGA AGAGAACATT
CTCAGTGTTC TTGAATTCAC TTCCCTCTCA AAAGCCGAAC AGCGGGAAAG AACCGAGGAG
ATGCTCGAGG ACCTGAACAT CGCCGGCATC CGGAAAAGCA TGGGCTATGC CCTCTCGGGA
GGTGAACGAC GCCGGACGGA AATAGCCCGC GCGCTTGCCA TCCGGCCGAA ATTCATTCTG
CTTGACGAAC CATTCGCCGG AGTCGATCCG ATCGCCGTGG AGGATATACA GGAGATAGTC
GAAGGCCTTG TCAAGCGAAA CATCGGGGTA CTCATCACGG ACCACAACGT CCATGAAACC
CTCTCCATCA CCAACCACGC GTATCTCCTG TTCGACGGCA CAATTTTCAT GCAGGGAACC
CCGGAAGAGA TCGCCGATAA TCCGGAAGCC CGAAAACTCT ACCTGGGCGA AAAATTCACC
CTTGATCGCT ACTGA
 
Protein sequence
MVSTLSCSNL KKIYNKREVV RSSTLEVRQG EIVGLLGPNG AGKTTTFYMI VGLIRPNVGD 
VFLDERNITA LPMYKRARLG IGYLPQESSV FRKLTVEENI LSVLEFTSLS KAEQRERTEE
MLEDLNIAGI RKSMGYALSG GERRRTEIAR ALAIRPKFIL LDEPFAGVDP IAVEDIQEIV
EGLVKRNIGV LITDHNVHET LSITNHAYLL FDGTIFMQGT PEEIADNPEA RKLYLGEKFT
LDRY