Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2132 |
Symbol | |
ID | 6375826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 2308556 |
End bp | 2309833 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642684622 |
Product | nickel-dependent hydrogenase large subunit |
Protein accession | YP_001960521 |
Protein GI | 189501051 |
COG category | [C] Energy production and conversion |
COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0448433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0283043 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAG TTAACTGCTC TATAGATGTC CACCATCTTA CACGGGTCGA AGGACATGGA GACATCCGCA TATCCATCAA AGAAGGAAAA CTGATCGATG CAACCTGGGC GGTTGTCGAA ACGCCAAGGT TTTTTGAAGT GATGGTCAAG GGTATGAGCG CTCAAAGAGT CCCGTTTCTC ACCTCAAGAA TATGCGGTAT CTGCTCGATC AGCCATGCTC TTGCAAGCAT CAGATCTCTT GAACGGGCAA TGGAGATAAC GCCGCCGGAC GCAGCAGAAA AAATAAGGCT GCTGGCCATG CATGGTGAAA CGCTGCAGAG CCACGCCTTA CACCTGTTCT TTCTTGCTAT TCCGGATTTT GTCAACACGC CCAGTGTGCT GCCGCTCATC AAGTCACATC CGGAGATTGT CCAGGCAGGA CTCCGGCTGA AAGAAGCGGG AAACGCGATC AGCGCACTGA CAACAGGAAG GCTCACCCAT CCGGTCAGTC TTGTTGTCGG CGGTGTCAGC AAAGCCCCTG AAAAAAAGGA TCTTCTCGCG CTCAAACATC AGCTCGAGGG CGTTCTGCCG GATCTCGAAA AAACCGATGC GTTCTGTAAA ACGCTGACAA TACCGGATTT CACAAGAGAG ACCGAATTTG TCTCTCTCTA CAACGGCATC ACCTATCCTT TCATCGGAGG AGACCTGCTC TCCACAGACG GCATCAGGCA GAATGAAAAC GAGTATCTGA CGATGACGAA CGAGTATCTG GAGGAGTATA CAACAAGCAA ACTCACCAAA CTGAGCAGGG AATCTTTTGC TGCCGGAGCA CTTGCACGAT TCAATAATAA CTATGCGTTC CTGCATCCCA GAGCCAAGGA GGCGGCAGAA ACGTTCGGCC TGAGACCAGT CAACCACAAC CCCTTCATGA ACAACATAGC GCAACTGGTC GAATGCCACC ATATTGTTCA TGACGCCATC TCCATGATCG AAAAGCTGCT TGACGACCCG CTCGACCAGT TGAAAACGCA ATGGACTCCA AAAGCGGGAG CTGCCACGGG AGCTGTTGAG GCTCCCAGAG GAATTCTCTA CCACCATATG GAGGTCGATG AAAGCGGAAA GGTTGTCAAA GGGGACTGCA TCATCCCGAC GACCCAGAAC AACGCAAACA TACACCTGGA CCTCAGCGCC CTTGCCTTAC AGGCTCTGGA AGAAGGAAAA AACGATAAAG AGATACAACT GCTCTGTGAA ATGGCAGTCA GGAGCTATGA CCCGTGCATC TCATGCTCGG TGCATTGA
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Protein sequence | MTKVNCSIDV HHLTRVEGHG DIRISIKEGK LIDATWAVVE TPRFFEVMVK GMSAQRVPFL TSRICGICSI SHALASIRSL ERAMEITPPD AAEKIRLLAM HGETLQSHAL HLFFLAIPDF VNTPSVLPLI KSHPEIVQAG LRLKEAGNAI SALTTGRLTH PVSLVVGGVS KAPEKKDLLA LKHQLEGVLP DLEKTDAFCK TLTIPDFTRE TEFVSLYNGI TYPFIGGDLL STDGIRQNEN EYLTMTNEYL EEYTTSKLTK LSRESFAAGA LARFNNNYAF LHPRAKEAAE TFGLRPVNHN PFMNNIAQLV ECHHIVHDAI SMIEKLLDDP LDQLKTQWTP KAGAATGAVE APRGILYHHM EVDESGKVVK GDCIIPTTQN NANIHLDLSA LALQALEEGK NDKEIQLLCE MAVRSYDPCI SCSVH
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