| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2118 |
|---|
| Symbol | |
|---|
| ID | 6375812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2294239 |
|---|
| End bp | 2294847 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642684609 |
|---|
| Product | outer surface protein, putative |
|---|
| Protein accession | YP_001960508 |
|---|
| Protein GI | 189501038 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000793309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0018778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAT GTATTCGTGT GTGTGCGGTA TTGCTGGTGC TTCTTGTGTC AGCACCACTT
GCTCAGGCGG CAACCCCTTA TGTCAGTGCA TCGGCTGGTT TGGGACTGCT CGCTGATTCG
GATTTCACTG ACAATACAGG TATTGTCAGT GACGCTGTTG ACTATAAGAC AGGCTACACC
GTCTCAGGGG CTGTCGGTCT GGATGCGGGA ACGCTCAGAC TTGAAGCTGC GCTTGGTTAC
CAGGTAAACG ATCTTGATGG CATTTCAGGA GTTCTTGGCC CCGACCCCGA CAATACCAGG
CTCGACATTC TTTCCCTGAT GGCTAACGGA TATCTCGATG TTGAGGTGCC TCTGTCGATG
ATTACTCCCT ATCTCATGGC CGGAGGAGGT CTTGCCAATG TGTCCTTCGA TTACGGGGAC
GGCAACAGTG ACGACGATAC GGTTCTGGCA TATCAGCTTG GGGCTGGCGT AGGGTTTACC
GGCATGCCCA ACGTGGTGAT CGATCTCGGT TACCGCTACT TTGCGACCAC GGATTTCACC
CCTGAAGATC CTTTCTCATT CACGATAGCC AGTCATAACA TCGTCGCCGG TGTTCGTTTT
GGTTTCTGA
|
|---|
| Protein sequence | MKQCIRVCAV LLVLLVSAPL AQAATPYVSA SAGLGLLADS DFTDNTGIVS DAVDYKTGYT
VSGAVGLDAG TLRLEAALGY QVNDLDGISG VLGPDPDNTR LDILSLMANG YLDVEVPLSM
ITPYLMAGGG LANVSFDYGD GNSDDDTVLA YQLGAGVGFT GMPNVVIDLG YRYFATTDFT
PEDPFSFTIA SHNIVAGVRF GF
|
|---|
| |