Gene Cphamn1_2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2108 
Symbol 
ID6375802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2282835 
End bp2283977 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content48% 
IMG OID642684599 
ProductIon transport 2 domain protein 
Protein accessionYP_001960498 
Protein GI189501028 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.64507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.2077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAC AGAAATTCAA TGTTCAGAAA GCAGAGCGTC CATGCCTCAT GGCAGCTGGA 
AATGGCGTAG CGGTTATCTG CGGGCTTTTT TTAATGCATC TCTTTTTTCT TTTCTCTCCG
TGTCCGGTAT CAGCTGCCGA AAAGGGAGAA AAACTGATTA TCGGCACCAA GCACTCTCCC
CCTTTTGTTA TGAAAAAAAG TGATGGTTCA TGGGAAGGAA TCAGTGTCGC TCTCTGGGAC
AAAATTGCTC TGGAGAACGG TTTTTCCTAT GAATTCCGGG AAATGGAATT GTCGGATATT
CTGAAAGGAG TTGCCGATAA CGAACTCGAT GCAGGCGTTG CCGCGATAAC CGTTACGGCA
GAACGGGAGG AAACGCTTGA TTTTTCTCAG CCGTATTATT TGTCACGGTT TGGGATTGCC
ACGCTGGAAG AGGGGGTTGA CTGGAAAAAT ATACTCAAGG TTTTTTTTTC GTACGGTTTT
TTCAGGATTG TCGTGCTGCT TTCCCTTGTA CTGCTGCTGT CGGGGTTTCT TGTCTGGCTT
TTCGAACGCC GGAAAAATCC GGAGCATTTC GGAGGGTCAC CGACGCATGG AATAGGGTCG
GGTTTCTGGT GGGCGGCAGT CACCATGACT ACGGTGGGAT ACGGCGACAA ATCCCCGAAA
ACCCCTGCAG GAAGAGTGGT CGCGCTTGTA TGGATGTTTG CGAGCCTCGT TATGATTTCA
GGCTTTACGG CGGCAATTAC AACCACTTTG ACTGTAGGCT CTCTCGGTGT CTCCGTTACC
AATCCACGAG ACCTTCATGC GGTAAAGACA GGAACGGTTG AAGGGTCTAC GAGTATGCAG
TATCTTAATG AAGAGTATAT CGCGTTTCAG CATTTCGCGA CAATTCAGGA TGCGCTGCAG
GCTCTTCAGG AAAGACGTGT CGAAGCGGTT CTCTATGATG AACCGATCAT GCGCTATATG
ATAGCTTCCG GAAAATTCCA GGGTATAAAG GTTATAGAGA CCTCTTTCCG GTACGAATAT
TATGCTGTCG CTCTTCCTCC GGACAGCCCG AGGACCGAAG ATATCAATCG TTCTCTGTTA
CACTATCTGG AGTCCGAGAA CTGGCGTAGT GTTCAATTCA GGTATCTGGA TGTTGTGCCA
TGA
 
Protein sequence
MPKQKFNVQK AERPCLMAAG NGVAVICGLF LMHLFFLFSP CPVSAAEKGE KLIIGTKHSP 
PFVMKKSDGS WEGISVALWD KIALENGFSY EFREMELSDI LKGVADNELD AGVAAITVTA
EREETLDFSQ PYYLSRFGIA TLEEGVDWKN ILKVFFSYGF FRIVVLLSLV LLLSGFLVWL
FERRKNPEHF GGSPTHGIGS GFWWAAVTMT TVGYGDKSPK TPAGRVVALV WMFASLVMIS
GFTAAITTTL TVGSLGVSVT NPRDLHAVKT GTVEGSTSMQ YLNEEYIAFQ HFATIQDALQ
ALQERRVEAV LYDEPIMRYM IASGKFQGIK VIETSFRYEY YAVALPPDSP RTEDINRSLL
HYLESENWRS VQFRYLDVVP