Gene Cphamn1_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2107 
Symbol 
ID6375801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2281380 
End bp2282585 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content50% 
IMG OID642684598 
Productdomain of unknown function DUF1745 
Protein accessionYP_001960497 
Protein GI189501027 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.206498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGCAA TTACCGTTGG CGTTGGTACA AGCCATCACC ATGACTCTTT CTCGGCAGGA 
AGAGAGGCTG TCGGACTTGC GTATGAAAAA ACAGGCGGGA AAGCAGACGT GCTGATTGTC
TTCGGGGCGA TGCAGTTTGA TCATAAGGCC CTGCTGAAAG GTATCACGTC GGTTTCGGGT
GATGTTCCCA TGGTCGGCGG AACGACAGCC GGGGAGATTT CGCCGGAAGG TTTTTCCGAG
GCTTCGGTTG TTGTTATGGC AATCAGCTCA CAGCACGTGA CCTTTGATAC GGGGATAGGA
CTGCATATGA GCCGGGGCGA AGAGAGCTGC GCTCGTGAGC TGATCGAGGA TATAGGCTTA
CAAACGCTTC TGAGCAAGTC CTCTTCTCTG CTTGTTTTTC CGAATGGTAT GGGCGGGGAT
GGCTTGAAAG TTCTTAAAGG TCTTCAAAAG CTTCTTGGCA GCGACTATGA AATATCAGGA
GGATATCTCG GTGATGATCT GCGTTTCCGT CAGACGTTTC AATATTACAA CGGGAAGGTT
TTTCGTGACG CGATCGTCGG CCTCAGTGTT TCTTTTGTTG ATTCATTCCT TACGGGTATT
GGTGTGAGAA GCGGGTTCGC ATCAATAGGC AACAGCTTTT ATTGTACATC ATCGACAGGA
AATGTCGTGA GGGAGTTCGA TCATGTGAGC GCGCTCGGAT TGTACAGGGA ATTTCTTGGA
GATGAACGTT CCGCACGTCT GCCGGGAATA TGTATGGAGT ACCCGTTCGG ACTTATTGAT
GAAGAAGCGG GCGAATCCGG AGAACGGTAT TTTCAGATAC GTTGCGGTTT GAGTGTTGAT
GAAAAGCAAG GAAGCATCAC CATGGCCGCT TCTATCCCTG AAGGCAGTGC CGTCACGCTG
ACAACCGGAT CCCGTGGGGA TGTGATCAAT GGCGCGCGTG AGGCTGCTGA ACAGGCAATG
CGACGGCTCG GAGGAGCTAA GCCTGAATTG ATTATCATGT TTAGTTGTGT TGGACGGAAA
CTGGTTCTTG GAAGAAGAAT CACTGAAGAA GTGGACGTCG TCAGAAAGAC CGTCGGATAT
GATGTCCCGA TCATCGGTTT TTATACCTAT GGTGAAATTG GCCCTATCGA CAGTTCCGTA
GAAAAGCTTG CTGAAGCAAA GTTTCACAAT GAGACGGTAG TGCTCTGGAT ATTGGGCAGT
GCATAA
 
Protein sequence
MCAITVGVGT SHHHDSFSAG REAVGLAYEK TGGKADVLIV FGAMQFDHKA LLKGITSVSG 
DVPMVGGTTA GEISPEGFSE ASVVVMAISS QHVTFDTGIG LHMSRGEESC ARELIEDIGL
QTLLSKSSSL LVFPNGMGGD GLKVLKGLQK LLGSDYEISG GYLGDDLRFR QTFQYYNGKV
FRDAIVGLSV SFVDSFLTGI GVRSGFASIG NSFYCTSSTG NVVREFDHVS ALGLYREFLG
DERSARLPGI CMEYPFGLID EEAGESGERY FQIRCGLSVD EKQGSITMAA SIPEGSAVTL
TTGSRGDVIN GAREAAEQAM RRLGGAKPEL IIMFSCVGRK LVLGRRITEE VDVVRKTVGY
DVPIIGFYTY GEIGPIDSSV EKLAEAKFHN ETVVLWILGS A