Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2098 |
Symbol | |
ID | 6375792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2269735 |
End bp | 2270412 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642684589 |
Product | protein of unknown function DUF975 |
Protein accession | YP_001960488 |
Protein GI | 189501018 |
COG category | [S] Function unknown |
COG ID | [COG5473] Predicted integral membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.274945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.188406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACAGG GAGCGCAACC GTTTGATTTC GGGCGAAAAG TTGATCCGAA AACGTTCGAA AAACTGATTG AAGAAGGCTA TGAGGTCGAT CCGTCAAAAT ATCTTAAAGA TGGCTGGGAA CTATTCAAAT CCCGTGCCGG TGAATTTATC GTTTTTACCC TGATTATCGG TGTGGCGGCG GCAGGGTTGT CACGGCTCGA TATGTTCGGA TCTCTCGCGG TGAGTGTTGT TACCGCTCCG CTCTATGCCG GATTCATTAT TGTTGTTTTT ATGCTTTTCA AGGGAGAGAC CGTACAGTTC GGTGATTTTT TCAAGGGGTT TCACTTTTTT CTGCCTCTTG TGCTGGCAAG TTTTGTTACA AGTATTCTTG TCGCTATAGG GATGGTGCTT CTCGTTCTGC CGGGAATCTA CCTGATGGTC AGTTATATGT TCGTTTCCAT GCTGATCGTT GACTATCGTA TGGAGTTCTG GCAGGCCATG GAGACAAGTC GGCAGATCGT GACGAAAAAC TGGTTTTCAC TTTTCGTGTT CTTTCTGGTG CTTGTGGCAA TCAATCTGCT TGGCGCGCTG GCGCTGGGTA TCGGAGTGCT GGTGACCGGG CCTTTGAGTG CTTGTGCGGT CTGCTGCGCC TATCGGGATA TCGTCGGATT GCATGAGGCG GGAGAGTTGA CAACGTAA
|
Protein sequence | MEQGAQPFDF GRKVDPKTFE KLIEEGYEVD PSKYLKDGWE LFKSRAGEFI VFTLIIGVAA AGLSRLDMFG SLAVSVVTAP LYAGFIIVVF MLFKGETVQF GDFFKGFHFF LPLVLASFVT SILVAIGMVL LVLPGIYLMV SYMFVSMLIV DYRMEFWQAM ETSRQIVTKN WFSLFVFFLV LVAINLLGAL ALGIGVLVTG PLSACAVCCA YRDIVGLHEA GELTT
|
| |