Gene Cphamn1_2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2098 
Symbol 
ID6375792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2269735 
End bp2270412 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content49% 
IMG OID642684589 
Productprotein of unknown function DUF975 
Protein accessionYP_001960488 
Protein GI189501018 
COG category[S] Function unknown 
COG ID[COG5473] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.274945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.188406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGG GAGCGCAACC GTTTGATTTC GGGCGAAAAG TTGATCCGAA AACGTTCGAA 
AAACTGATTG AAGAAGGCTA TGAGGTCGAT CCGTCAAAAT ATCTTAAAGA TGGCTGGGAA
CTATTCAAAT CCCGTGCCGG TGAATTTATC GTTTTTACCC TGATTATCGG TGTGGCGGCG
GCAGGGTTGT CACGGCTCGA TATGTTCGGA TCTCTCGCGG TGAGTGTTGT TACCGCTCCG
CTCTATGCCG GATTCATTAT TGTTGTTTTT ATGCTTTTCA AGGGAGAGAC CGTACAGTTC
GGTGATTTTT TCAAGGGGTT TCACTTTTTT CTGCCTCTTG TGCTGGCAAG TTTTGTTACA
AGTATTCTTG TCGCTATAGG GATGGTGCTT CTCGTTCTGC CGGGAATCTA CCTGATGGTC
AGTTATATGT TCGTTTCCAT GCTGATCGTT GACTATCGTA TGGAGTTCTG GCAGGCCATG
GAGACAAGTC GGCAGATCGT GACGAAAAAC TGGTTTTCAC TTTTCGTGTT CTTTCTGGTG
CTTGTGGCAA TCAATCTGCT TGGCGCGCTG GCGCTGGGTA TCGGAGTGCT GGTGACCGGG
CCTTTGAGTG CTTGTGCGGT CTGCTGCGCC TATCGGGATA TCGTCGGATT GCATGAGGCG
GGAGAGTTGA CAACGTAA
 
Protein sequence
MEQGAQPFDF GRKVDPKTFE KLIEEGYEVD PSKYLKDGWE LFKSRAGEFI VFTLIIGVAA 
AGLSRLDMFG SLAVSVVTAP LYAGFIIVVF MLFKGETVQF GDFFKGFHFF LPLVLASFVT
SILVAIGMVL LVLPGIYLMV SYMFVSMLIV DYRMEFWQAM ETSRQIVTKN WFSLFVFFLV
LVAINLLGAL ALGIGVLVTG PLSACAVCCA YRDIVGLHEA GELTT